Transcript Information: R_Transcript_46635.p1


Annotated TAIR IDAT5G56040.2
Annotated Gene NameLeucine-rich receptor-like protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22695050-22698410 | Forward length=1090
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.1250914508516
Replicate 27.2672297605028
Replicate 39.9514551376684
Condition 2: 8 Hour
Replicate 17.1426207294819
Replicate 26.5626495323373
Replicate 38.1123612139285
Condition 3: 24 Hour
Replicate 111.755380328905
Replicate 210.939093615666
Replicate 38.0248408798526


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_46635.p1 GENE.R_Transcript_46635~~R_Transcript_46635.p1 ORF type:complete len:1121 (+),score=172.44,LRR_8|PF13855.2|5.7e-07,LRR_8|PF13855.2|13,LRR_8|PF13855.2|36,LRR_8|PF13855.2|0.03,LRR_8|PF13855.2|0.0008,LRR_8|PF13855.2|2.7e-08,LRR_8|PF13855.2|3.2e-07,LRR_8|PF13855.2|0.31,LRR_8|PF13855.2|1.9e-05,LRR_8|PF13855.2|9.1e-07,LRR_8|PF13855.2|4.6e-07,LRR_8|PF13855.2|6.4e-05,LRR_8|PF13855.2|0.00018,Pkinase|PF00069.21|8.5e-43,Pkinase_Tyr|PF07714.13|6.5e-42,LRR_4|PF12799.3|2.2e+02,LRR_4|PF12799.3|1.4,LRR_4|PF12799.3|0.0012,LRR_4|PF12799.3|0.00016,LRR_4|PF12799.3|7,LRR_4|PF12799.3|9.6,LRR_4|PF12799.3|1,LRR_4|PF12799.3|0.022,LRR_4|PF12799.3|0.0099,LRR_4|PF12799.3|0.13,LRR_4|PF12799.3|0.21,LRR_4|PF12799.3|10,LRR_4|PF12799.3|2.9,LRR_4|PF12799.3|77,LRR_4|PF12799.3|3.8,LRR_4|PF12799.3|0.047,LRR_4|PF12799.3|0.0015,LRR_4|PF12799.3|0.025,LRR_4|PF12799.3|0.00013,LRRNT_2|PF08263.8|8.2e-12,LRR_1|PF00560.29|1.4e+02,LRR_1|PF00560.29|25,LRR_1|PF00560.29|9.8,LRR_1|PF00560.29|12,LRR_1|PF00560.29|3e+03,LRR_1|PF00560.29|0.65,LRR_1|PF00560.29|42,LRR_1|PF00560.29|1.3e+03,LRR_1|PF00560.29|2e+02,LRR_1|PF00560.29|9.9e+02,LRR_1|PF00560.29|54,LRR_1|PF00560.29|19,LRR_1|PF00560.29|3.6e+03,LRR_1|PF00560.29|1.8e+02,LRR_1|PF00560.29|69,LRR_1|PF00560.29|1.3,LRR_1|PF00560.29|1.1e+02,LRR_1|PF00560.29|11 R_Transcript_46635:516-3878(+)
ATGCCTGTTAATCACCTATGGCACCACCACCTCTTTGTTTTTCTTTCCCTTCTACTCATCCTTTGTCTTTCATTGTCTTCTTCCCTTGCCATCAACCCGCAAGGCGAGGCTCTCCTTTCGTGGAAGCGAAGCCTAAATGGATCGGTCGAGGCCTTGAAGAGTTGGAACCCGAGTGATCAAACCCCTTGTAGGTGGTTTGGGATCACTTGTAATTCCAACAATGAGGTCATTGAATTGAACTTGAGGTACGTAGATTTGTATGGAAATGTTCCTTCCAACTTGGGCTCTTTATCACTGACCTTAACAAAGCTTGCCCTCGTGGGAACGAACCTTACTGGTTCGATCCCAAAAGAGATAGGTTTGCTCAATGAGCTCGAGTCCTTAGACTTGAGTGACAATGCATTGAATGGTGAAATCCCAAGTGAGATATGCTACTTGCCTAAGTTAGAGGAGCTTTATCTAAACTCGAATCAAATAGAAGGGTCTATACCTATGGATATTGGGAATTTGAAAAGCTTAGTTTGGTTGATCCTCTATGACAACCAACTTAGCGGGCGAATCCCGAGCACCATAGGGAGCCTCAAGAAGCTAGCAGTTATAAGAGCAGGTGGCAACAAGAATCTTGAAGGGCCATTGCCTTTAGAGCTTGGCAACTGTACTGATTTGGTCATACTTGGATTAGCAGAAACCAGCATCTCTGGTGCTCTGCCTTCCACCATAGGCAATCTCAAGAAACTCGAGACGCTTGCCATCTACACTGCCCTCCTCTCCGGCAAGATCCCACCGGAGATAGGCGATTGCATCAACTTACAAAGCATCTACCTCTACGAGAACTCGCTCTCGGGGTCAATCCCAAGCAGTTTGGGGAACCTCAAGAATCTCCAAACCTTGCTCCTCTGGCAGAACACTCTTGTGGGCACCATCCCTCCGGAGCTAGGGAGGTTGTCGAAGCTTCGAGTCATTGATATGTCGATGAATTCCTTGACGGGTAGCATACCCGATTCATTCGGAAACTTGACAAGCTTACAAGAGCTTCAATTAAGTGTAAATCAGTTGTCAGGTCCAATCCCATCTTCTTTGGGATCATGCAGTAGCCTTAGCCTCATTGAGCTAGACAACAACCAGTTAAGTGGCGCAATCCCGCCGGAACTCGGTCAGTTGGGTAACCTTTCTCTCCTCTATTTATGGCAAAACAAACTTGAGGGTAACATCCCATCAACCTTGGCTAATTGCCAGAACTTAGAAGCCATTGATTTCTCATTAAACAGCTTAACTGGGGTTATCCCAAAAGGGATCTTCCAGCTTCAAAGTCTCAACAAATTGCTATTGTTATCCAACAATTTGTCGGGCCCGATCCCTTCAGAATTTGGGAATTGCACTTCATTGGTCAGATTCAGAGGAAATGATAACAAACTCACTGGGTCAATTCCTTCAACTGTTGGTGAGCTTAAAAATCTCAACTTCTTTGATCTTGGATCCAACAGGCTTACTGGTGTAATTCCAGAAGAAATCTCAGGCTGTCAGAATCTCACTTTCCTTGACCTTCACTCCAACTCAATCTCTGGTACTTTACCTGTAAGTTTAAGCTCTCTATTATCTATCCAGTTTATTGATGTGTCTGACAATATGATTGAAGGGGAGCTAAGCTCAAATGTTGGGTCATTGAGTTCACTCACTAAACTCGTCCTGGGAAAGAATAAACTCACTGGGTCAATCCCGAGTCATATTGGTTCATGCTCAAAGCTCCAAATGATTGATCTTAGTAGCAACCAATTTTCCGGCGAGATTCCGGGCACTATTGGGAAGATTCTCGGCTTAGAAATCACTTTAAATCTTAGCTGGAACCAACTTTCCGGCGAGATCCCACCGGAGTTCTCATCGTTGAGCAAGCTTGGTGTGCTTGATCTTTCCCATAATAAGTTATCTGGTGATCTACATTCTCTCGCAAGCCTCCAGAATCTAGTGGTGTTGAATATCTCCAACAACGACTTTTCCGGCCACTTGCCGGACACGCCGTTCTTCTCGAAACTCCCCGCCGGAGTTCTCGCCGGAAACCCTGGCCTCTGCGCCTCCGGAGACCGCAAATGTTCCGGCGGCGGGAAGAGTGCTCGGCGGACGAGGGGGGCAAGGGTGGCAATGGTGGTGCTCCTTTCAGTGGCATGTGCTCTCCTTTTAGCAGCCCTCTACATTATTGTTAATGGGGCGAAGAAGTCCCGTGAGGCCCATGATAGAGACGACGTGGAATGTCCCGAGGATGATGTGGAGATGGGGCCCCCATGGGAGGTTACATTGTATCAAAAGTTGGAACTCTCAATTGGTGATGTGGCAAGGGGTATGATACCGGGGAATATCATCGGCCGGGGGAGGTCCGGGGCCGTGTATAGGATTACCCTTCCGTCGGGTCTAGTGGTTGCCGTAAAGAAGCTCAAGGCGGCGGATAAGACGTCGGTGGCTTTCTTCGCCTCGGAGATAGCCACATTGGGCCGGATTCGACACCGGAACATTGTTAAGCTTTTAGGGTGGGCAGCTAACCGGAAGACCAAACTCTTGTTTTATGAGTATATGTCAAATGGTACTCTTGGTGAATTGCTACATGAGGGTGACACCACTACTAATGTTGCTGTACAATGGGATACTCGGTTCAAGATAGCTTTGGGAGTTGCTGAGGGGATTGCTTATTTGCATCATGATTGTGTACCAGCTATAGTTCATCGAGATATAAAGGTTCATAACATATTGTTGGGTGATAGATATGAGGCTAGCTTAGCTGACTTTGGTCTTGCTAGCTATGTTGAAGATCAAAGTGACCAGATGAATACAGCTCCACAATTTGCTGGATCATATGGGTATATGGCTCCTGAGCATGCGTGCATGGCGAGGATCACAGAAAAGAGCGATGTGTTCAGTTATGGAGTTGTTTTGTTAGAGATCATTACAGGGAAAAAACCTGTTGATCCATCGTTTCCAGATGGGCAGCATGTTATTCAATGGGTACGAGAATACTTGAGGGATAAAAAGGACCCTGTTGAGATTATTGATTCTAAGTTGCAAGGCCATCCAGACACGCAAATTCAAGAGATGCTCCAAGCATTAGGAATCGCTCTCCTATGCACCAGCAACCGGGCAGAGGATCGCCCGACAATGAAAGATGTTGCTGTATTATTGAAAGAGATTAGGCACGAGCCTCCAAATGGAAGCGAGGCTACCAAGCCTACTAGCAACGTCCCGAAAAAACAAGAAAACACACCATTATCGTCGTCGGCATCAGTGACCCCATCTCAACTGTTACTCTTACAAGGTTCATCAAATTGCTCACTCGCCTATTCGTCTTCATCAGCCACTTACCTTCCACAAAATCAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_46635.p1 GENE.R_Transcript_46635~~R_Transcript_46635.p1 ORF type:complete len:1121 (+),score=172.44,LRR_8|PF13855.2|5.7e-07,LRR_8|PF13855.2|13,LRR_8|PF13855.2|36,LRR_8|PF13855.2|0.03,LRR_8|PF13855.2|0.0008,LRR_8|PF13855.2|2.7e-08,LRR_8|PF13855.2|3.2e-07,LRR_8|PF13855.2|0.31,LRR_8|PF13855.2|1.9e-05,LRR_8|PF13855.2|9.1e-07,LRR_8|PF13855.2|4.6e-07,LRR_8|PF13855.2|6.4e-05,LRR_8|PF13855.2|0.00018,Pkinase|PF00069.21|8.5e-43,Pkinase_Tyr|PF07714.13|6.5e-42,LRR_4|PF12799.3|2.2e+02,LRR_4|PF12799.3|1.4,LRR_4|PF12799.3|0.0012,LRR_4|PF12799.3|0.00016,LRR_4|PF12799.3|7,LRR_4|PF12799.3|9.6,LRR_4|PF12799.3|1,LRR_4|PF12799.3|0.022,LRR_4|PF12799.3|0.0099,LRR_4|PF12799.3|0.13,LRR_4|PF12799.3|0.21,LRR_4|PF12799.3|10,LRR_4|PF12799.3|2.9,LRR_4|PF12799.3|77,LRR_4|PF12799.3|3.8,LRR_4|PF12799.3|0.047,LRR_4|PF12799.3|0.0015,LRR_4|PF12799.3|0.025,LRR_4|PF12799.3|0.00013,LRRNT_2|PF08263.8|8.2e-12,LRR_1|PF00560.29|1.4e+02,LRR_1|PF00560.29|25,LRR_1|PF00560.29|9.8,LRR_1|PF00560.29|12,LRR_1|PF00560.29|3e+03,LRR_1|PF00560.29|0.65,LRR_1|PF00560.29|42,LRR_1|PF00560.29|1.3e+03,LRR_1|PF00560.29|2e+02,LRR_1|PF00560.29|9.9e+02,LRR_1|PF00560.29|54,LRR_1|PF00560.29|19,LRR_1|PF00560.29|3.6e+03,LRR_1|PF00560.29|1.8e+02,LRR_1|PF00560.29|69,LRR_1|PF00560.29|1.3,LRR_1|PF00560.29|1.1e+02,LRR_1|PF00560.29|11 R_Transcript_46635:516-3878(+)
MPVNHLWHHHLFVFLSLLLILCLSLSSSLAINPQGEALLSWKRSLNGSVEALKSWNPSDQTPCRWFGITCNSNNEVIELNLRYVDLYGNVPSNLGSLSLTLTKLALVGTNLTGSIPKEIGLLNELESLDLSDNALNGEIPSEICYLPKLEELYLNSNQIEGSIPMDIGNLKSLVWLILYDNQLSGRIPSTIGSLKKLAVIRAGGNKNLEGPLPLELGNCTDLVILGLAETSISGALPSTIGNLKKLETLAIYTALLSGKIPPEIGDCINLQSIYLYENSLSGSIPSSLGNLKNLQTLLLWQNTLVGTIPPELGRLSKLRVIDMSMNSLTGSIPDSFGNLTSLQELQLSVNQLSGPIPSSLGSCSSLSLIELDNNQLSGAIPPELGQLGNLSLLYLWQNKLEGNIPSTLANCQNLEAIDFSLNSLTGVIPKGIFQLQSLNKLLLLSNNLSGPIPSEFGNCTSLVRFRGNDNKLTGSIPSTVGELKNLNFFDLGSNRLTGVIPEEISGCQNLTFLDLHSNSISGTLPVSLSSLLSIQFIDVSDNMIEGELSSNVGSLSSLTKLVLGKNKLTGSIPSHIGSCSKLQMIDLSSNQFSGEIPGTIGKILGLEITLNLSWNQLSGEIPPEFSSLSKLGVLDLSHNKLSGDLHSLASLQNLVVLNISNNDFSGHLPDTPFFSKLPAGVLAGNPGLCASGDRKCSGGGKSARRTRGARVAMVVLLSVACALLLAALYIIVNGAKKSREAHDRDDVECPEDDVEMGPPWEVTLYQKLELSIGDVARGMIPGNIIGRGRSGAVYRITLPSGLVVAVKKLKAADKTSVAFFASEIATLGRIRHRNIVKLLGWAANRKTKLLFYEYMSNGTLGELLHEGDTTTNVAVQWDTRFKIALGVAEGIAYLHHDCVPAIVHRDIKVHNILLGDRYEASLADFGLASYVEDQSDQMNTAPQFAGSYGYMAPEHACMARITEKSDVFSYGVVLLEIITGKKPVDPSFPDGQHVIQWVREYLRDKKDPVEIIDSKLQGHPDTQIQEMLQALGIALLCTSNRAEDRPTMKDVAVLLKEIRHEPPNGSEATKPTSNVPKKQENTPLSSSASVTPSQLLLLQGSSNCSLAYSSSSATYLPQNQ*

Click here to download the sequence:
Link to NCBI Protein BLAST