Transcript Information: R_Transcript_46640.p1


Annotated TAIR IDAT5G56040.2
Annotated Gene NameLeucine-rich receptor-like protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22695050-22698410 | Forward length=1090
E-Value2.3E-274
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9850095038257
Replicate 21.1810418984168
Replicate 31.8611724296874
Condition 2: 8 Hour
Replicate 10.73457594841736
Replicate 20.67082645523557
Replicate 31.5882659292839
Condition 3: 24 Hour
Replicate 11.6070465059393
Replicate 22.0125423737652
Replicate 31.6415778515173


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_46640.p1 GENE.R_Transcript_46640~~R_Transcript_46640.p1 ORF type:complete len:800 (+),score=111.84,LRR_8|PF13855.2|3.8e-07,LRR_8|PF13855.2|8.6,LRR_8|PF13855.2|3.9,LRR_8|PF13855.2|0.024,LRR_8|PF13855.2|2e-08,LRR_8|PF13855.2|2.2e-07,LRR_8|PF13855.2|0.2,LRR_8|PF13855.2|1.2e-05,LRR_8|PF13855.2|5.9e-07,LRR_8|PF13855.2|1.2e-07,LRR_8|PF13855.2|4.7e-06,LRR_8|PF13855.2|0.00021,LRR_4|PF12799.3|3.8,LRR_4|PF12799.3|0.00018,LRR_4|PF12799.3|9.8e-05,LRR_4|PF12799.3|4,LRR_4|PF12799.3|6.4,LRR_4|PF12799.3|1.2,LRR_4|PF12799.3|0.015,LRR_4|PF12799.3|0.0064,LRR_4|PF12799.3|0.06,LRR_4|PF12799.3|0.15,LRR_4|PF12799.3|8.6,LRR_4|PF12799.3|2.1,LRR_4|PF12799.3|64,LRR_4|PF12799.3|2.1e+03,LRR_4|PF12799.3|2.7,LRR_4|PF12799.3|0.0026,LRR_4|PF12799.3|0.0017,LRR_4|PF12799.3|0.014,LRR_4|PF12799.3|5e-05,LRR_1|PF00560.29|84,LRR_1|PF00560.29|17,LRR_1|PF00560.29|6.6,LRR_1|PF00560.29|7.8,LRR_1|PF00560.29|2e+03,LRR_1|PF00560.29|0.44,LRR_1|PF00560.29|28,LRR_1|PF00560.29|8.5e+02,LRR_1|PF00560.29|1.3e+02,LRR_1|PF00560.29|8.1e+02,LRR_1|PF00560.29|36,LRR_1|PF00560.29|13,LRR_1|PF00560.29|3.5e+02,LRR_1|PF00560.29|1.2e+02,LRR_1|PF00560.29|3e+02,LRR_1|PF00560.29|0.88,LRR_1|PF00560.29|72,LRR_1|PF00560.29|16,LRRNT_2|PF08263.8|5.5e-12 R_Transcript_46640:516-2915(+)
ATGCCTGTTAATCACCTATGGCACCACCACCTCTTTGTTTTTCTTTCCCTTCTACTCATCCTTTGTCTTTCATTGTCTTCTTCCCTTGCCATCAACCCGCAAGGCGAGGCTCTCCTTTCGTGGAAGCGAAGCCTAAATGGATCGGTCGAGGCCTTGAAGAGTTGGAACCCGAGTGATCAAACCCCTTGTAGGTGGTTTGGGATCACTTGTAATTCCAACAATGAGGTCATTGAATTGAACTTGAGGTACGTAGATTTGTATGGAAATGTTCCTTCCAACTTGGGCTCTTTATCACTGACCTTAACAAAGCTTGCCCTCGTGGGAACGAACCTTACTGGTTCGATCCCAAAAGAGATAGGTTTGCTCAATGAGCTCGAGTCCTTAGACTTGAGTGACAATGCATTGAATGGTGAAATCCCAAGTGAGATATGCTACTTGCCTAAGTTAGAGGAGCTTTATCTAAACTCGAATCAAATAGAAGGGTCTATACCTATGGATATTGGGAATTTGAAAAGCTTAGTTTGGTTGATCCTCTATGACAACCAACTTAGCGGGCGAATCCCGAGCACCATAGGGAGCCTCAAGAAGCTAGCAGTTATAAGAGCAGGTGGCAACAAGAATCTTGAAGGGCCATTGCCTTTAGAGCTTGGCAACTGTACTGATTTGGTCATACTTGGATTAGCAGAAACCAGCATCTCTGGTGCTCTGCCTTCCACCATAGGCAATCTCAAGAAACTCGAGACGCTTGCCATCTACACTGCCCTCCTCTCCGGCAAGATCCCACCGGAGATAGGCGATTGCATCAACTTACAAAGCATCTACCTCTACGAGAACTCGCTCTCGGGGTCAATCCCAAGCAGTTTGGGGAACCTCAAGAATCTCCAAACCTTGCTCCTCTGGCAGAACACTCTTGTGGGCACCATCCCTCCGGAGCTAGGGAGGTTGTCGAAGCTTCGAGTCATTGATATGTCGATGAATTCCTTGACGGGTAGCATACCCGATTCATTCGGAAACTTGACAAGCTTACAAGAGCTTCAATTAAGTGTAAATCAGTTGTCAGGTCCAATCCCATCTTCTTTGGGATCATGCAGTAGCCTTAGCCTCATTGAGCTAGACAACAACCAGTTAAGTGGCGCAATCCCGCCGGAACTCGGTCAGTTGGGTAACCTTTCTCTCCTCTATTTATGGCAAAACAAACTTGAGGGTAACATCCCATCAACCTTGGCTAATTGCCAGAACTTAGAAGCCATTGATTTCTCATTAAACAGCTTAACTGGGGTTATCCCAAAAGGGATCTTCCAGCTTCAAAGTCTCAACAAATTGCTATTGTTATCCAACAATTTGTCGGGCCCGATCCCTTCAGAATTTGGGAATTGCACTTCATTGGTCAGATTCAGAGGAAATGATAACAAACTCACTGGGTCAATTCCTTCAACTGTTGGTGAGCTTAAAAATCTCAACTTCTTTGATCTTGGATCCAACAGGCTTACTGGTGTAATTCCAGAAGAAATCTCAGGCTGTCAGAATCTCACTTTCCTTGACCTTCACTCCAACTCAATCTCTGGTACTTTACCTGTAAGTTTAAGCTCTCTGTTATCTCTCCAGTTTATTGATGTGTCTGATAATATGATTGAAGGGGAGCTAAGCTCAAATGTTGGGTCATTGAGTTCACTCACTAAACTCGTCCTGGGAAAGAATAAACTCACTGGGTCAATCCCGAGTCATATTGGTTCATGCTCAAAGCTCCAAATGATTGATCTTAGTAGCAACCAATTTTACGGCGAGATTCCGGGTACTATTGGAAAGATTCCGGCCTTAGAGATCACTTTAAATCTGAGCTGGAACCAACTTTCCGGCGAGATCCCACCGGAGTTCTCATCGTTGAGCAAGCTTGGTGTGCTTGATCTTTCCCATAATAAGTTATCTGGTGATCTACATTCTCTCGCAAGCCTCCAGAATCTAGTGGTGTTGAATATCTCCAACAATGACTTTTCCGGCCAGTTACCGGACACGCCGTTCTTCTCCAAACTCCCCGCCGGAGTTCTTGCCGGAAACCCTGGTCTCTGCGCTGTCGGTGACCGGAAATGTTCCGCCGGCGGGAAGAGTGCTCGGCGGACGAGGGGGGCAAGGGTGGCAATGGTGGTGCTCCTTTCAGTGGCATGTGCTCTCCTTTTAGCAGCCCTCTTAAGCTCAAAAGGCGTATTCTCCGGACGCCCTCACCGGCCCCCCAGTGCCGCTCAGCCCTCTACATTATTGTTAGTGGGGCCAAGAAGTTCCGTGGGGCCCATGATAGAGATGACGTGGAATGTCCCGAGGATGATGTGGAGATGGGGCCCCCATGGGAGGTTACATTGTATCAAAAGTTGGACCTCTCAATTGCTGATGTGGCAAGGGGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_46640.p1 GENE.R_Transcript_46640~~R_Transcript_46640.p1 ORF type:complete len:800 (+),score=111.84,LRR_8|PF13855.2|3.8e-07,LRR_8|PF13855.2|8.6,LRR_8|PF13855.2|3.9,LRR_8|PF13855.2|0.024,LRR_8|PF13855.2|2e-08,LRR_8|PF13855.2|2.2e-07,LRR_8|PF13855.2|0.2,LRR_8|PF13855.2|1.2e-05,LRR_8|PF13855.2|5.9e-07,LRR_8|PF13855.2|1.2e-07,LRR_8|PF13855.2|4.7e-06,LRR_8|PF13855.2|0.00021,LRR_4|PF12799.3|3.8,LRR_4|PF12799.3|0.00018,LRR_4|PF12799.3|9.8e-05,LRR_4|PF12799.3|4,LRR_4|PF12799.3|6.4,LRR_4|PF12799.3|1.2,LRR_4|PF12799.3|0.015,LRR_4|PF12799.3|0.0064,LRR_4|PF12799.3|0.06,LRR_4|PF12799.3|0.15,LRR_4|PF12799.3|8.6,LRR_4|PF12799.3|2.1,LRR_4|PF12799.3|64,LRR_4|PF12799.3|2.1e+03,LRR_4|PF12799.3|2.7,LRR_4|PF12799.3|0.0026,LRR_4|PF12799.3|0.0017,LRR_4|PF12799.3|0.014,LRR_4|PF12799.3|5e-05,LRR_1|PF00560.29|84,LRR_1|PF00560.29|17,LRR_1|PF00560.29|6.6,LRR_1|PF00560.29|7.8,LRR_1|PF00560.29|2e+03,LRR_1|PF00560.29|0.44,LRR_1|PF00560.29|28,LRR_1|PF00560.29|8.5e+02,LRR_1|PF00560.29|1.3e+02,LRR_1|PF00560.29|8.1e+02,LRR_1|PF00560.29|36,LRR_1|PF00560.29|13,LRR_1|PF00560.29|3.5e+02,LRR_1|PF00560.29|1.2e+02,LRR_1|PF00560.29|3e+02,LRR_1|PF00560.29|0.88,LRR_1|PF00560.29|72,LRR_1|PF00560.29|16,LRRNT_2|PF08263.8|5.5e-12 R_Transcript_46640:516-2915(+)
MPVNHLWHHHLFVFLSLLLILCLSLSSSLAINPQGEALLSWKRSLNGSVEALKSWNPSDQTPCRWFGITCNSNNEVIELNLRYVDLYGNVPSNLGSLSLTLTKLALVGTNLTGSIPKEIGLLNELESLDLSDNALNGEIPSEICYLPKLEELYLNSNQIEGSIPMDIGNLKSLVWLILYDNQLSGRIPSTIGSLKKLAVIRAGGNKNLEGPLPLELGNCTDLVILGLAETSISGALPSTIGNLKKLETLAIYTALLSGKIPPEIGDCINLQSIYLYENSLSGSIPSSLGNLKNLQTLLLWQNTLVGTIPPELGRLSKLRVIDMSMNSLTGSIPDSFGNLTSLQELQLSVNQLSGPIPSSLGSCSSLSLIELDNNQLSGAIPPELGQLGNLSLLYLWQNKLEGNIPSTLANCQNLEAIDFSLNSLTGVIPKGIFQLQSLNKLLLLSNNLSGPIPSEFGNCTSLVRFRGNDNKLTGSIPSTVGELKNLNFFDLGSNRLTGVIPEEISGCQNLTFLDLHSNSISGTLPVSLSSLLSLQFIDVSDNMIEGELSSNVGSLSSLTKLVLGKNKLTGSIPSHIGSCSKLQMIDLSSNQFYGEIPGTIGKIPALEITLNLSWNQLSGEIPPEFSSLSKLGVLDLSHNKLSGDLHSLASLQNLVVLNISNNDFSGQLPDTPFFSKLPAGVLAGNPGLCAVGDRKCSAGGKSARRTRGARVAMVVLLSVACALLLAALLSSKGVFSGRPHRPPSAAQPSTLLLVGPRSSVGPMIEMTWNVPRMMWRWGPHGRLHCIKSWTSQLLMWQGV*

Click here to download the sequence:
Link to NCBI Protein BLAST