Transcript Information: R_Transcript_467326.p1


Annotated TAIR IDAT1G77710.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ubiquitin-like, Ufm1 (InterPro:IPR005375); Has 244 Blast hits to 244 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 149; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:29206750-29207895 | Forward length=93
E-Value1.7E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.50903861324783
Condition 2: 8 Hour
Replicate 10.2720651660805
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.48639343748661


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_467326.p1 GENE.R_Transcript_467326~~R_Transcript_467326.p1 ORF type:5prime_partial len:90 (+),score=18.52,Ufm1|PF03671.10|1.1e-38 R_Transcript_467326:2-271(+)
TCAAAAGGCGGGCAAAAAGTTACATTCAAAATTACATTAACATCTGATCCTTCTCTCCCTTTCAGAGTTGTAAGCGTACCAGAATCAGCACCATTTACTGCTGTATTAAAATTTGCAGCAGATGAGTTTCAAGTTGCTTCTTCTTCCAGTGCTATCCTCACTACTGATGGAGTAGCAGTCAATCCCGCCCAAACAGCTGGAGCTATATTTTTGAAGCATGGTTCAGAGTTGAAGTTAATTCCAAGAGACCGAGTTGGGTTTTCATTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_467326.p1 GENE.R_Transcript_467326~~R_Transcript_467326.p1 ORF type:5prime_partial len:90 (+),score=18.52,Ufm1|PF03671.10|1.1e-38 R_Transcript_467326:2-271(+)
SKGGQKVTFKITLTSDPSLPFRVVSVPESAPFTAVLKFAADEFQVASSSSAILTTDGVAVNPAQTAGAIFLKHGSELKLIPRDRVGFSF*

Click here to download the sequence:
Link to NCBI Protein BLAST