Transcript Information: R_Transcript_467508.p1


Annotated TAIR IDAT3G28730.1
Annotated Gene Namehigh mobility group
Annotated Gene Symbol(s)ATHMG, SSRP1, NFD, HMG
Annotation TypeHomolog
Chromosome Positionchr3:10784954-10788498 | Forward length=646
E-Value2E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.36946350961536
Condition 2: 8 Hour
Replicate 10.19746665280036
Replicate 20.18032969226763
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_467508.p1 GENE.R_Transcript_467508~~R_Transcript_467508.p1 ORF type:3prime_partial len:124 (+),score=25.10,HMG_box|PF00505.15|5.4e-26,HMG_box_2|PF09011.6|7.1e-17 R_Transcript_467508:18-386(+)
ATGCCTCGTGGTGCTTCTGGAACGTCGAAGAAAGCAAGCAAAGATCCAAATGCTCCTAAACGACCATTATCAGCATTCTTTCTCTTTTCACAAGATGAACGACCTGATATTAAGAAAAAAAATCCATCCTTATCTGTTGGAGACATTTCCAAAGAAATCGGTGCACGATGGAAAAAAGTCAGTGATGATGTGAAAAAACGTTATGAACAAAAAGCAAGTGTAGAAAAACAAAAGTACGAACAACGTCTTTCGGAATACAAAAAGAGTGGTGGTGGTAGCGCTTCACCAGCTAAAGCCAGTAAAGGCGCAGCAAAGGCACCAGCTAAGCAATCACCCAAGAAAGCAGCACCCAAGAAGGGCGCCTCCAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_467508.p1 GENE.R_Transcript_467508~~R_Transcript_467508.p1 ORF type:3prime_partial len:124 (+),score=25.10,HMG_box|PF00505.15|5.4e-26,HMG_box_2|PF09011.6|7.1e-17 R_Transcript_467508:18-386(+)
MPRGASGTSKKASKDPNAPKRPLSAFFLFSQDERPDIKKKNPSLSVGDISKEIGARWKKVSDDVKKRYEQKASVEKQKYEQRLSEYKKSGGGSASPAKASKGAAKAPAKQSPKKAAPKKGASK

Click here to download the sequence:
Link to NCBI Protein BLAST