Transcript Information: R_Transcript_467774.p1


Annotated TAIR IDAT3G54560.1
Annotated Gene Namehistone H2A 11
Annotated Gene Symbol(s)HTA11
Annotation TypeOrtholog
Chromosome Positionchr3:20196532-20197466 | Forward length=136
E-Value5.4E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.12945362379233
Replicate 20.14890993203048
Replicate 30.48737739566282
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.31284055163939
Replicate 30.31046389626805


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_467774.p1 GENE.R_Transcript_467774~~R_Transcript_467774.p1 ORF type:5prime_partial len:141 (+),score=21.04,Histone|PF00125.20|2.8e-16,Histone_H2A_C|PF16211.1|2e-13 R_Transcript_467774:2-424(+)
ATCTTTGTGATGTCCGACCCAGCACCAACCGCAACCAAAGTAAGAAAACAAACACCAATTAGAAAGCAGAAGAAGAAACCAATCTCTCGTTCTGCCAGAGCAGGACTTCAGTTTCCTGTAGGAAGAATTCATAGATTCCTTAAAAGCAGAGTTACCACTGGGAGAGTCGGTGCAACTGCCGCTGTGTACAGCGCAGCTATTTTAGAATACCTCACTGCAGAAGTTTTGGAGTTGGCAGGAAACGAGTGTAAAGATCAAGGTGTAAAACGTATCACTCCACGACATCTCCAACTTGCAATTAGAGGAGATGAAGAATTAGATTCACTTATTAAAGCAACAATTGCTGGAGGAGGGGTGATTCCACACATTCACAAGGCTTTAGTATCGAAGAAATCAAAAACAGGAACGATGGAGGAGGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_467774.p1 GENE.R_Transcript_467774~~R_Transcript_467774.p1 ORF type:5prime_partial len:141 (+),score=21.04,Histone|PF00125.20|2.8e-16,Histone_H2A_C|PF16211.1|2e-13 R_Transcript_467774:2-424(+)
IFVMSDPAPTATKVRKQTPIRKQKKKPISRSARAGLQFPVGRIHRFLKSRVTTGRVGATAAVYSAAILEYLTAEVLELAGNECKDQGVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKALVSKKSKTGTMEEE*

Click here to download the sequence:
Link to NCBI Protein BLAST