Transcript Information: R_Transcript_46814.p1


Annotated TAIR IDAT1G51130.1
Annotated Gene NameNse4, component of Smc5/6 DNA repair complex
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:18939480-18941560 | Reverse length=403
E-Value7E-117
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.335946169912
Replicate 215.32026705017
Replicate 314.577014833915
Condition 2: 8 Hour
Replicate 113.121611837758
Replicate 213.373733158604
Replicate 316.414614388771
Condition 3: 24 Hour
Replicate 118.783660459031
Replicate 214.510038743801
Replicate 317.803396156806


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_46814.p1 GENE.R_Transcript_46814~~R_Transcript_46814.p1 ORF type:complete len:418 (+),score=94.94,Nse4_C|PF08743.6|3.1e-23 R_Transcript_46814:249-1502(+)
ATGGCGAGAGTGAAGAGAGAGCCAGGAAGTAGTAGTACCAATAATGACGCTAACAATGGTGGTGTGAGAGAAACCAGAAGGAGTCGTGGTAGAAGAATTGCTGAAGAAGAAAACGATGAAAATCGTCAAAACTACGAGCAGCAAGAAGAAGTAGAAGAAGGAGCGAATGAAGTTGCTGTGAGACGAGCTCTTCGATCCAAATACCTAGCCGTCAAGAATTTGCTTTCCGGTGAGACGGAGGATTTGTTGGAGGCGCGTCTTGATAAGTTCAAGAGTATTATCAATGAGGTGGAAAATTTGCATCAGAAAGTTCAGAAGCCTAGGGAACAAGTGGCAGATGCTGAGGCATTGTTAGACATTACAAGCAGTTTTGTGAAATCTGTTAAAGCACAAAAAAATGATGGAGTAACTCCATCAGATTTTGTTACATGCCTGCTGAGGGACTTTAACCGTCAACATAGAGCTACTTGCAGTGAAGATGGTGCCAGGAACGTGATACTTTGGAAAGACATTGGCCTTGCTGTATCCCATATTTTCAGAAGAGGCACTGGATGCTGCACCATGCTTGGGCCTATGGGTGCTGAAATGAAGAGAAGAAAGCCTGCAGTTCGTAAAAGACATGTGAAGCCCGCTGAAACCGCTCGGCCTGAGGAGCTCGATAGTACTACAGAAGAGAAAACCGATACAGATAAGAATATGTCAACCATGTTTGGTATATTGGGGAAGAATAGAACGGTCAAACTGGAAAATCTGGTGCTAAACAGAATCTCTTTTGCACAAACTGTGGAGAACTTATTTGCCCTGTCATTTCTTGTCAAAGATGGAAGAGCTGAAGTTACTGTGAATGAGAGTGGCCATTTCGTCTGCCCAAGGAACGCCCCAGCTGCCCAGGATGTAGCATCAGCCAAAGTTTCATACAGTCACTTTGTCTTCAGATTTGACTTCAAGGACTGGAAGTTGATGTTGGATTCCGTTGAAGAGGGCACGGAGTTGATGCCACATAGGCTTCAAGCTAATATGGATGCTGGTTCTCCAGATAGGGTTGAACCAGAAACATTTCTGAACCCTGAGCCCCCAAAAGACTCGGTGCCTGTAGAACCTGAAACAACAACAGCAACAACTCCCATCAGGAAGTTATCGAGGAACCGAGGTCTGGTTCTACAGGAACAAACGGTCGTGGAAGACTCGCCTGAAAATGACGATAACGTAACTAGAGCTGATTTTATCAGAAAGGGAAAGCGTAAACTTCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_46814.p1 GENE.R_Transcript_46814~~R_Transcript_46814.p1 ORF type:complete len:418 (+),score=94.94,Nse4_C|PF08743.6|3.1e-23 R_Transcript_46814:249-1502(+)
MARVKREPGSSSTNNDANNGGVRETRRSRGRRIAEEENDENRQNYEQQEEVEEGANEVAVRRALRSKYLAVKNLLSGETEDLLEARLDKFKSIINEVENLHQKVQKPREQVADAEALLDITSSFVKSVKAQKNDGVTPSDFVTCLLRDFNRQHRATCSEDGARNVILWKDIGLAVSHIFRRGTGCCTMLGPMGAEMKRRKPAVRKRHVKPAETARPEELDSTTEEKTDTDKNMSTMFGILGKNRTVKLENLVLNRISFAQTVENLFALSFLVKDGRAEVTVNESGHFVCPRNAPAAQDVASAKVSYSHFVFRFDFKDWKLMLDSVEEGTELMPHRLQANMDAGSPDRVEPETFLNPEPPKDSVPVEPETTTATTPIRKLSRNRGLVLQEQTVVEDSPENDDNVTRADFIRKGKRKLL*

Click here to download the sequence:
Link to NCBI Protein BLAST