Transcript Information: R_Transcript_46816.p2


Annotated TAIR IDAT1G51130.1
Annotated Gene NameNse4, component of Smc5/6 DNA repair complex
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:18939480-18941560 | Reverse length=403
E-Value5E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.431911552314
Replicate 223.363530365194
Replicate 319.762675573151
Condition 2: 8 Hour
Replicate 114.763536218192
Replicate 219.620577693981
Replicate 319.931180289052
Condition 3: 24 Hour
Replicate 119.131506023087
Replicate 214.487277898713
Replicate 322.209582696999


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_46816.p2 GENE.R_Transcript_46816~~R_Transcript_46816.p2 ORF type:complete len:204 (+),score=39.46,Nse4_C|PF08743.6|2e-23 R_Transcript_46816:1088-1699(+)
ATGTTATTGCAGCTCGATAGTACTACAGAAGAGAAAACCGATACAGATAAGAATATGTCAACTATGTTTGGTATATTGAGGAAGAATAGAAGGGTCAAACTGGAAAATCTGTTGGTAAACAGAATCTCTTTTGCACAAACTGTGGAGAACTTATTTGCCCTGTCATTTCTTGTCAAAGATGGAAGAGCTGAAGTTACTGTGAATGAGAGTGGCCATTTCGTCTGCCCAAGGAACGCCCCAGCTGCCCAGGATGTAGCATCAGCCAAAGTTTCATACAGTCACTTTGTCTTCAGATTTGACTTCAAGGACTGGAAGTTGATGTTGGATTCCGTTGAAGAGGGCACGGAGTTGATGCCACATAGGCTTCAAGCTAATATGTATGCTAGTTCTCCAGAAAGGGTTGAACCAGAAACATTTGTGAACTCTGAGCCCCCAGAAGACTCAGTGCCTGTAGAACCTGAAACAACAACAGCAACAACTCCCATCAGGAAGTTATCGAGGAACCGAGGTCTGGTTCTACAGGAACAAACGGTCGTGGAAGACTCGCCTGAAAATGACGATAACGTAACTAGAGCTGATTTTATCAGAAAGGGAAAGCGTAAACTTCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_46816.p2 GENE.R_Transcript_46816~~R_Transcript_46816.p2 ORF type:complete len:204 (+),score=39.46,Nse4_C|PF08743.6|2e-23 R_Transcript_46816:1088-1699(+)
MLLQLDSTTEEKTDTDKNMSTMFGILRKNRRVKLENLLVNRISFAQTVENLFALSFLVKDGRAEVTVNESGHFVCPRNAPAAQDVASAKVSYSHFVFRFDFKDWKLMLDSVEEGTELMPHRLQANMYASSPERVEPETFVNSEPPEDSVPVEPETTTATTPIRKLSRNRGLVLQEQTVVEDSPENDDNVTRADFIRKGKRKLL*

Click here to download the sequence:
Link to NCBI Protein BLAST