Transcript Information: R_Transcript_468457.p1


Annotated TAIR IDAT3G19780.1
Annotated Gene NameLOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF179 (InterPro:IPR003774), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF179) (TAIR:AT1G33780.1); Has 74 Blast hits to 72 proteins in 32 species: Archae - 0; Bacteria - 24; Metazoa - 11; Fungi - 3; Plants - 32; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:6870238-6874677 | Forward length=1059
E-Value2E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 21.3693239401933
Replicate 31.4939176693143
Condition 2: 8 Hour
Replicate 10.26615070594832
Replicate 20.24305306349115
Replicate 31.5784009235119
Condition 3: 24 Hour
Replicate 10.49908276581965
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_468457.p1 GENE.R_Transcript_468457~~R_Transcript_468457.p1 ORF type:internal len:92 (-),score=15.21 R_Transcript_468457:2-274(-)
TCTCATGATGACTTGAAGGATCTTATAACAAAGCTGCCGGTAGTCTATTCAATTGATTGTACTTTGAATGAGTGTGGCTGGATCCTTAATTCAGTGGGCCAAACTGAAGTTTATCCAACCCTACTCCTCTTTCCAGCAAAGAAGAAGACAGCTATCCCTTACAATGGAAACGTGATGGTCACAGACATTATCAAATTTATAGCAAACCATGGAAGTATTTCAAATCATCTTGCCAAGCAGAAGGGATCCATAGCTTACAAACTGGACAATGTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_468457.p1 GENE.R_Transcript_468457~~R_Transcript_468457.p1 ORF type:internal len:92 (-),score=15.21 R_Transcript_468457:2-274(-)
SHDDLKDLITKLPVVYSIDCTLNECGWILNSVGQTEVYPTLLLFPAKKKTAIPYNGNVMVTDIIKFIANHGSISNHLAKQKGSIAYKLDNV

Click here to download the sequence:
Link to NCBI Protein BLAST