Transcript Information: R_Transcript_46909.p1


Annotated TAIR IDAT4G16830.1
Annotated Gene NameHyaluronan / mRNA binding family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:9470621-9472308 | Forward length=355
E-Value2.8E-120
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1172.11379249269
Replicate 2183.09239254988
Replicate 3187.63219687485
Condition 2: 8 Hour
Replicate 1157.69982272118
Replicate 2162.90614748565
Replicate 3165.72772466702
Condition 3: 24 Hour
Replicate 1213.17055353813
Replicate 2195.6869646164
Replicate 3188.01598956806


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_46909.p1 GENE.R_Transcript_46909~~R_Transcript_46909.p1 ORF type:complete len:361 (+),score=136.66,HABP4_PAI-RBP1|PF04774.11|1.2e+04,HABP4_PAI-RBP1|PF04774.11|2.8e-28,HABP4_PAI-RBP1|PF04774.11|4.6e+02,Stm1_N|PF09598.6|2.6e-15,Stm1_N|PF09598.6|1.6e+04,Stm1_N|PF09598.6|1.2e+03,Stm1_N|PF09598.6|95 R_Transcript_46909:547-1629(+)
ATGGCAACAATGAACCCTTTTGATTTGTTGTTGGACAATGATAACGATGACCCATCACAGCTTATAGAGTCTCAGTTGCAAAAGGTAGCAGTTCCTCTTTCTTCTAAGAAAGGCACACCAGCAACACAATCCCAGCAACAAAAATCTGCCAAGTTGCCCACCAAACCCCTCCCTCCTTCTCAGGCTGTTCGGGAGGCAAGGAATGACACTGGCCGTGGTAGTGGCCGTGGTTTTGGACGTGGCGGCGGTGGTCGTGGTCGTGGTGGTGGATACAATCGGGACTACTCTAGCAATGAAAATGCTTTTGGCAACACTGGACTGCCTGGTGGGCAAGGAGAGGAAGGGGATGGGAAAACCTCTGAAAGGCGACCTTATGGAGGGCCTCGTGGCCCTTATCGTGGTGGCCGCAGAGGGGGTTTCAACAATGAAGAGGGGAGAGATGGGGACCGCCCTCGTAGGCCATTTGAGCGCCGAAGTGGGACCGGGCGTGGCGGTGAGCTTAAACGTGAGGGGGCTGGCCATGGAAATTGGGGTACCCAGTCAGATGAAGTTACTCCAGTAACTGAGGAAGCTGGTGAAGAAACTGAGAAGAATGTGAATGCTGAGAATCTTCCTGGAGAAGATGCTGTAGATGCTAACAAAGAGGGCCAGCCAGAAGAAGCTGAAGAAAAAGAGCCAGAAGAAAAGGAGATGACTCTTGAAGAGTATGAGAAGCTGCTAGAAGAGAAGCGGAAGGCTTTATTAGCGCTCAAGACTGAAGAGCGGAAGGTGGAGGTTGACAAGGAATTCGAGTCTATGCAACAACTTTCAAACAAGAAGGATGATGAGTCTGTCTTCATCAAATTGGGCTCTGATAAGGATAAGAAGAAGGAAGCTGCTGAAAAGGAGAAAGCAAAGAAGGCTGTCAGTATTAACGAGTTTCTGAAGCCTGCTGACGGAGAGAGGTATTACAACCCTGGCCGTGGCAGGGGACGTGGTGGTCGTGGTTCACGAGGTGGATACAGTGGAAGCAACAGAAACATCAATTATGCTGCTCCTAAAATTGAGGATCCCGGGCAGTTCCCAACTTTAGGTGGCAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_46909.p1 GENE.R_Transcript_46909~~R_Transcript_46909.p1 ORF type:complete len:361 (+),score=136.66,HABP4_PAI-RBP1|PF04774.11|1.2e+04,HABP4_PAI-RBP1|PF04774.11|2.8e-28,HABP4_PAI-RBP1|PF04774.11|4.6e+02,Stm1_N|PF09598.6|2.6e-15,Stm1_N|PF09598.6|1.6e+04,Stm1_N|PF09598.6|1.2e+03,Stm1_N|PF09598.6|95 R_Transcript_46909:547-1629(+)
MATMNPFDLLLDNDNDDPSQLIESQLQKVAVPLSSKKGTPATQSQQQKSAKLPTKPLPPSQAVREARNDTGRGSGRGFGRGGGGRGRGGGYNRDYSSNENAFGNTGLPGGQGEEGDGKTSERRPYGGPRGPYRGGRRGGFNNEEGRDGDRPRRPFERRSGTGRGGELKREGAGHGNWGTQSDEVTPVTEEAGEETEKNVNAENLPGEDAVDANKEGQPEEAEEKEPEEKEMTLEEYEKLLEEKRKALLALKTEERKVEVDKEFESMQQLSNKKDDESVFIKLGSDKDKKKEAAEKEKAKKAVSINEFLKPADGERYYNPGRGRGRGGRGSRGGYSGSNRNINYAAPKIEDPGQFPTLGGK*

Click here to download the sequence:
Link to NCBI Protein BLAST