Transcript Information: R_Transcript_46921.p1


Annotated TAIR IDAT3G27730.1
Annotated Gene NameATP binding;ATP-dependent helicases;DNA helicases
Annotated Gene Symbol(s)RCK, MER3
Annotation TypeOrtholog
Chromosome Positionchr3:10273952-10280213 | Reverse length=1133
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.95565240600622
Replicate 20.24733861746948
Replicate 30.62963545748587
Condition 2: 8 Hour
Replicate 10.48074342173911
Replicate 21.2585313078154
Replicate 31.1404153269353
Condition 3: 24 Hour
Replicate 11.3822763514063
Replicate 20.57736279818265
Replicate 31.2032507812169


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_46921.p1 GENE.R_Transcript_46921~~R_Transcript_46921.p1 ORF type:3prime_partial len:764 (+),score=164.34,Sec63|PF02889.12|2.6e-53,Helicase_C|PF00271.27|9.9e-09,HHH_5|PF14520.2|1e-05 R_Transcript_46921:1250-3538(+)
ATGGTTCCTCCTGAAGGGATGAAAAGGTTTGGTGAGGAAATGAGGCCTGTCAAGCTGACTACCAGAGTTTTTGGGTATGCAGCGGCAAAGAATGATTTTCTCTTTGAAAAGCGGCTCCAAAACTATATATTCGATATTTTGATGCAATACTCTAGAGGGAAATCTGCTCTTGTTTTCTGTTCAACAAGAAAGGGGGCACAAGAGGCAGCGCAGAAGATCTCTCAGACAGCTATGACATATGGATATTCAAATCCATTTATCAAGGCTCAAGAACAACAAGAAAGATTGAGGGAGGCTTCATTATCATGCAGTGACAAACAACTGCAATCATACATTCTCTTTGGCGTTGGCTATCACAATGGCGGTCTCTGCATGAAGGATCGAAACCTTGTGGAGAGTCTTTTTCTGAATGGTGATATTCGAATTCTGTGCACGACAAACACACTTGCACATGGAATCAACCTACCTGCACATACAGTTGTGATCAAATCAACACAGCACTACAATAAGGAAAAGGGCACATACACGGAGTATGACCGATCCACTGTATTGCAGATGTGTGGCAGAGCAGGTCGTCCTCCATTTGATGATACAGGAATGGTTATTATAATGACAAGAAAAGAAACAGTACATTTGTATGAAAATCTTTTGCATGGATGTGAAGTTGTGGAATCACAATTGCTTTCTTGTATGATGGAGCATCTAACTGCGGAAATAGTACAGCTTACTGTTCCTGATGTTACACGAGCGATTGAATGGATGAAGTGCTCATACTTGTATGTGCGCATGAAAAAGAACCCAGAGACTTATGCTGTGAAAGGGATCTCTAGAGACCATATTGAGAGGCATATGCAAGATATTTGTGTTCAGAAAGTCAATGAGTTATCAAGCAATCAGATGGTTTGGACTGATGAATATGGTTTTCTGCTGAAGCCTCTTGAGCCTGGAAGGTTGATGACAAAATACTATTTGAAATTCAGCACAATGAAGTACATAATACAGGCTCAATCAAACTGCAGTCTACAAGATGCACTTCATATTGTTTGCCAAGCAGAGGAGTTTTCTTGGATACAGCTAAGAAGGAATGAGAAGAAGCTTCTAAATGATATCAATACTGATAAAGAAGGCCGGCTTCGCTTTCACATCCTTGGAGACAAAGGGAAAAAGAAAAAGCGCATTCAGACCAGAGAAGAGAAGATTTTCGTTTTGGCAAATGACTGCCTGACTGGTGATCCTTTGGTTCATGATTTATCCCTAACCCAGGATGCCAATTCAATTTGCTCAAATGGTTGTAGAATTGCCAAGTGCATGAAGGAGTTATTTATATTCAGAAAGAACTATAAAGGAGCATTGAACTCGATTCTTCTTGCGAAATCCTTGCATCATAAGTTGTGGGATGATAGTCCCTACTTGTTGAAGCAATTACCTGGGATTGGAGTTGTGACTGCAAAGGCTCTTCATTCTATGGGAATAATCTCTTTTGAGAATCTGGCTGAGGCTGATCCCAGGAGAATAGAGATTGTTGCTGGTCGAAAGTTCCCGTTCGGCGACCATGTTAAAGAGTCTTTACTTGCACTACCTCCAAAGGTAGAGATGAAAACTGAGGTAATTGGCAGCCACCGGCAAGGGAATTTCAAGCTGGCAATAACTTTGACTAGGTTGACACAGGCTCAAACTGCCAAACGACATTATGCTGACATGGTTGTTGGCCTGGAAGAAGAAAATATGATCATTTATCATGAGAAGATAAGGGTGGATGATTTCCTCAGTCCATATCACACAACAGTGCCTCTATCAAGCCACCAACAAGGAAAGCTAACTGTCAAAGCTGATCTGATTTTTGAAGAATTTATTGGTGTTGATCTACACCAAAAACTTGAGCTGATTGAAGAGAGCAAACCAAATATGACTGTCAGACATGGAAACAAGAGATCTTCTTCTGTCATTCATCCTGCAAAAGTTTCTCCTGTCAAAAGCAACATGCTAAAGACAACCATAGCTGACAAGAAACCTGTACCTAGTAAATCTATAAAGGCAATTGATAACATGGACATGCCCTCTTTCAAACTCATTGATGATGAGATAGAAGAAGGTATTGTGACCAAAGAGACTGATGAGGATGACTGCAAGATTATATCTGAAAATTCTATATTTGATCACATTCGCAAAAAGGCCAAGGATTTTCCTGTGGTGACAACTTCAGGAAATAATAACCCACAACAAATGATAATCAGCCCTGATCCCAGTAATAACCTGCAGCAAATGGTAGTCAGGCCAGTTTCTGGAACA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_46921.p1 GENE.R_Transcript_46921~~R_Transcript_46921.p1 ORF type:3prime_partial len:764 (+),score=164.34,Sec63|PF02889.12|2.6e-53,Helicase_C|PF00271.27|9.9e-09,HHH_5|PF14520.2|1e-05 R_Transcript_46921:1250-3538(+)
MVPPEGMKRFGEEMRPVKLTTRVFGYAAAKNDFLFEKRLQNYIFDILMQYSRGKSALVFCSTRKGAQEAAQKISQTAMTYGYSNPFIKAQEQQERLREASLSCSDKQLQSYILFGVGYHNGGLCMKDRNLVESLFLNGDIRILCTTNTLAHGINLPAHTVVIKSTQHYNKEKGTYTEYDRSTVLQMCGRAGRPPFDDTGMVIIMTRKETVHLYENLLHGCEVVESQLLSCMMEHLTAEIVQLTVPDVTRAIEWMKCSYLYVRMKKNPETYAVKGISRDHIERHMQDICVQKVNELSSNQMVWTDEYGFLLKPLEPGRLMTKYYLKFSTMKYIIQAQSNCSLQDALHIVCQAEEFSWIQLRRNEKKLLNDINTDKEGRLRFHILGDKGKKKKRIQTREEKIFVLANDCLTGDPLVHDLSLTQDANSICSNGCRIAKCMKELFIFRKNYKGALNSILLAKSLHHKLWDDSPYLLKQLPGIGVVTAKALHSMGIISFENLAEADPRRIEIVAGRKFPFGDHVKESLLALPPKVEMKTEVIGSHRQGNFKLAITLTRLTQAQTAKRHYADMVVGLEEENMIIYHEKIRVDDFLSPYHTTVPLSSHQQGKLTVKADLIFEEFIGVDLHQKLELIEESKPNMTVRHGNKRSSSVIHPAKVSPVKSNMLKTTIADKKPVPSKSIKAIDNMDMPSFKLIDDEIEEGIVTKETDEDDCKIISENSIFDHIRKKAKDFPVVTTSGNNNPQQMIISPDPSNNLQQMVVRPVSGT

Click here to download the sequence:
Link to NCBI Protein BLAST