Transcript Information: R_Transcript_469257.p1


Annotated TAIR IDAT3G17040.1
Annotated Gene Namehigh chlorophyll fluorescent 107
Annotated Gene Symbol(s)HCF107
Annotation TypeHomolog
Chromosome Positionchr3:5809378-5812605 | Reverse length=652
E-Value2E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.53163963945783
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_469257.p1 GENE.R_Transcript_469257~~R_Transcript_469257.p1 ORF type:internal len:103 (+),score=12.42,Mad3_BUB1_I|PF08311.8|0.0028,Mad3_BUB1_I|PF08311.8|0.012,Mad3_BUB1_I|PF08311.8|1.8e+02,TPR_11|PF13414.2|0.011,TPR_11|PF13414.2|0.00024,TPR_19|PF14559.2|0.048,TPR_19|PF14559.2|0.0022,TPR_19|PF14559.2|0.59,TPR_2|PF07719.13|0.03,TPR_2|PF07719.13|0.033,TPR_2|PF07719.13|3.3e+02,ANAPC3|PF12895.3|6.3e-07,ANAPC3|PF12895.3|6.8e+02,TPR_14|PF13428.2|17,TPR_14|PF13428.2|0.11,TPR_14|PF13428.2|0.026,TPR_12|PF13424.2|1e+04,TPR_12|PF13424.2|0.00077,TPR_12|PF13424.2|0.098 R_Transcript_469257:2-307(+)
GAAGCTGAGGATATCTATCGAAGAGGCAGTGAGAAATGCAGTAATCCAGATGTAATATACCTGAAATGGGCAGACCTATTAATTAAACAAGACAAATATGAGGAAGCTGAGGATATCTATCGAAAAGGCAGTGAGGAATGCAGTAATCCATATGGAATATACGTGAACTGGGCAGACCTATTCATTAAACAAGACAAATATGAGGAAGCTGAGGATATCTATCGAAGAGGCAGTGAGAAATGCAGTAATCCAGATGTAATATACCTGAAATGGGCAGACCTATTAATTAAACAAGACAAATATGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_469257.p1 GENE.R_Transcript_469257~~R_Transcript_469257.p1 ORF type:internal len:103 (+),score=12.42,Mad3_BUB1_I|PF08311.8|0.0028,Mad3_BUB1_I|PF08311.8|0.012,Mad3_BUB1_I|PF08311.8|1.8e+02,TPR_11|PF13414.2|0.011,TPR_11|PF13414.2|0.00024,TPR_19|PF14559.2|0.048,TPR_19|PF14559.2|0.0022,TPR_19|PF14559.2|0.59,TPR_2|PF07719.13|0.03,TPR_2|PF07719.13|0.033,TPR_2|PF07719.13|3.3e+02,ANAPC3|PF12895.3|6.3e-07,ANAPC3|PF12895.3|6.8e+02,TPR_14|PF13428.2|17,TPR_14|PF13428.2|0.11,TPR_14|PF13428.2|0.026,TPR_12|PF13424.2|1e+04,TPR_12|PF13424.2|0.00077,TPR_12|PF13424.2|0.098 R_Transcript_469257:2-307(+)
EAEDIYRRGSEKCSNPDVIYLKWADLLIKQDKYEEAEDIYRKGSEECSNPYGIYVNWADLFIKQDKYEEAEDIYRRGSEKCSNPDVIYLKWADLLIKQDKYE

Click here to download the sequence:
Link to NCBI Protein BLAST