Transcript Information: R_Transcript_47055.p1


Annotated TAIR IDAT2G29580.1
Annotated Gene NameCCCH-type zinc fingerfamily protein with RNA-binding domain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:12652011-12654158 | Forward length=483
E-Value1.1E-237
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 140.261819644351
Replicate 232.503888144461
Replicate 337.047242919931
Condition 2: 8 Hour
Replicate 145.345938354225
Replicate 253.408106243755
Replicate 356.235085979699
Condition 3: 24 Hour
Replicate 153.332752175128
Replicate 245.128452806873
Replicate 349.078968586389


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47055.p1 GENE.R_Transcript_47055~~R_Transcript_47055.p1 ORF type:complete len:520 (+),score=109.39,RRM_1|PF00076.18|7.9e-13,RRM_6|PF14259.2|1e-07,Torus|PF16131.1|8.2e-07,Torus|PF16131.1|1.6e+04,RRM_5|PF13893.2|1.4e-05 R_Transcript_47055:130-1689(+)
ATGGCACATAGGCTGCTAAGGGATCTCGAGGCCGATGGCTGGGAACGCTCCGACTTCCCCATCATCTGCGAATCTTGTCTTGGTGACAACCCCTACGTTCGCATGACAAGAGCAGATTATGACAAGGAATGTAAGATCTGCACAAGGCCCTTTACAGTTTTTCGTTGGAGGCCAGGTCGTGATGCAAGATATAAAAAAACTGAGATTTGTCAGACATGCAGCAAATTGAAAAATGTATGCCAGGTCTGTCTTCTGGATCTTGAGTATGGTCTCCCAGTCCAGGTTCGAGATACTGCTCTCAGCATCAGCACCAATGATGCCATTCCAAAGAGTGACGTGAATAGGGAATACTTTGCAGAAGAGCATGACCGCAAGGCTAGAGCTGGTTTGGATTATGAATCCTCATATGGTAAGGTGCGCCCCAATGACACTATTATGAAGCTTCAGAGGACAGCACCATACTACAAAAGAAACAGAGCACATGTTTGTAGTTTCTACATACGAGGTGAATGTACAAGAGGTGCTGAATGTCCTTACAGGCATGAGATGCCCGTCACGGGAGAACTGTCACAGCAGAACATAAAAGATCGTTATTATGGAGTGAATGATCCAGTTGCCTTAAAGCTTCTCAACAAGGCTGGGGAAATGCAGTCTCTTGAACCCCCAGAGGATGAGAGCATTAAGACACTTTACGTAGGTGGTCTAGATGCTAGGATCACTGAGCAAGATCTAAGAGATAACTTCTATGCTCATGGTGAAATTGAATCAATAAGAATGGTACTTCAGCGAGCATGTGCATTTGTAACCTACACCACAAGGGAAGCTGCTGAGAAGGCCGCAGAAGAGCTCTCGAACAAACTTGTTGTAAAGGGTCTGAGGCTGAAACTCATGTGGGGTAGACCTCAACAACCAAAACTGGAGACAGATGGTGCAGAACAAGCAAAACAACAAGCAGCAGTGGCACACAGTGGGATGCTTCCCAGGGCAGTTATATCTCAGCAACAGAGTCAACTTCATCCACCTGGTACTCAGGATCAGATCCCTCCGCCTATGCCTTACTTCAATATTCCACCGCCACCTCAGCAAGAGAGGGCATTCTATCCATCAATGGATCCCCAACGAATGGGTGCCCTTGTCCCGTCTCAGGTAGGATCTTCAAACAGTCCTTCAGGATCCGGGGATGGCAAACCTGGGTTAGAAAAGCCTCCGCAAGGTCAGCAACCATATGGCTACCACCAGGGTATGCCATATCAGCAACCCTTTTACCGGCCTTATGGTTACATGCCCCCACCACCTCCTCCCACACAGTACCAGCACTACCATCCTGCTCAGCACCACCACCAACCTGCAATGCCGCCACCTCCACCACCGACCCAGCAACAGCATCATCAGCAGCCTGGATCGCAACAGCATCATCAGCAGCCCGGATCGCAACAGCATCATCAGCAGCCCGGATCGCAACAGCATCATCAGCAGCCCGGATCGCAACAGCATCATCAGCAGCCCGGATCGCAACAGCATGATCAGGAGCCTGGATCTTCAGGGACATCTCAGCAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47055.p1 GENE.R_Transcript_47055~~R_Transcript_47055.p1 ORF type:complete len:520 (+),score=109.39,RRM_1|PF00076.18|7.9e-13,RRM_6|PF14259.2|1e-07,Torus|PF16131.1|8.2e-07,Torus|PF16131.1|1.6e+04,RRM_5|PF13893.2|1.4e-05 R_Transcript_47055:130-1689(+)
MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTRADYDKECKICTRPFTVFRWRPGRDARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSISTNDAIPKSDVNREYFAEEHDRKARAGLDYESSYGKVRPNDTIMKLQRTAPYYKRNRAHVCSFYIRGECTRGAECPYRHEMPVTGELSQQNIKDRYYGVNDPVALKLLNKAGEMQSLEPPEDESIKTLYVGGLDARITEQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREAAEKAAEELSNKLVVKGLRLKLMWGRPQQPKLETDGAEQAKQQAAVAHSGMLPRAVISQQQSQLHPPGTQDQIPPPMPYFNIPPPPQQERAFYPSMDPQRMGALVPSQVGSSNSPSGSGDGKPGLEKPPQGQQPYGYHQGMPYQQPFYRPYGYMPPPPPPTQYQHYHPAQHHHQPAMPPPPPPTQQQHHQQPGSQQHHQQPGSQQHHQQPGSQQHHQQPGSQQHHQQPGSQQHDQEPGSSGTSQQ*

Click here to download the sequence:
Link to NCBI Protein BLAST