Transcript Information: R_Transcript_471468.p1


Annotated TAIR IDAT5G04870.1
Annotated Gene Namecalcium dependent protein kinase 1
Annotated Gene Symbol(s)CPK1, ATCPK1
Annotation TypeHomolog
Chromosome Positionchr5:1417015-1419877 | Reverse length=610
E-Value1E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.59002084210229
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_471468.p1 GENE.R_Transcript_471468~~R_Transcript_471468.p1 ORF type:internal len:83 (+),score=8.38,EF-hand_1|PF00036.28|0.00034,EF-hand_1|PF00036.28|4e-07,EF-hand_8|PF13833.2|0.005,EF-hand_8|PF13833.2|3e-08,EF-hand_6|PF13405.2|0.0013,EF-hand_6|PF13405.2|5.9e-06,EF-hand_7|PF13499.2|1.6e-09,EF-hand_5|PF13202.2|0.71,EF-hand_5|PF13202.2|8.6e-06 R_Transcript_471468:3-248(+)
GCTGCATGCTTAGCACGAGGTGCCCAGGGTATCAAAGGTCTCTCCATTTTGTTTAAAATTATGGACGATGATAAGAACCGAAAATTAAGCTTAGAAGAATTTCAAAAGGGTGTTGAAGAGTATGGCTTAAATTTTTCAAAAAGTGAAATTTCCGAACTATTTCGCTTGATTGACACTGATCATAGTGGATCTATCGACTATGAGGAGTTCTTACGTAAACTACGGCCTCCAATCAATAACTTTCGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_471468.p1 GENE.R_Transcript_471468~~R_Transcript_471468.p1 ORF type:internal len:83 (+),score=8.38,EF-hand_1|PF00036.28|0.00034,EF-hand_1|PF00036.28|4e-07,EF-hand_8|PF13833.2|0.005,EF-hand_8|PF13833.2|3e-08,EF-hand_6|PF13405.2|0.0013,EF-hand_6|PF13405.2|5.9e-06,EF-hand_7|PF13499.2|1.6e-09,EF-hand_5|PF13202.2|0.71,EF-hand_5|PF13202.2|8.6e-06 R_Transcript_471468:3-248(+)
AACLARGAQGIKGLSILFKIMDDDKNRKLSLEEFQKGVEEYGLNFSKSEISELFRLIDTDHSGSIDYEEFLRKLRPPINNFR

Click here to download the sequence:
Link to NCBI Protein BLAST