Transcript Information: R_Transcript_47198.p1


Annotated TAIR IDAT5G64040.2
Annotated Gene Namephotosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN)
Annotated Gene Symbol(s)PSAN
Annotation TypeHomolog
Chromosome Positionchr5:25628690-25629409 | Reverse length=181
E-Value3E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 131.278132121436
Replicate 214.269330380008
Replicate 317.346849830096
Condition 2: 8 Hour
Replicate 19.8656640321425
Replicate 26.7299741463762
Replicate 35.0225330357381
Condition 3: 24 Hour
Replicate 16.2409573046186
Replicate 24.2825745418597
Replicate 34.2500397450286


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47198.p1 GENE.R_Transcript_47198~~R_Transcript_47198.p1 ORF type:5prime_partial len:206 (+),score=59.51,PsaN|PF05479.7|1.3e+03,PsaN|PF05479.7|1.3e-66 R_Transcript_47198:2-619(+)
CCACCAAATACCAACAAAACTCTATTATACCATAACTTCAAACCATCAAAAGAAAACTTTCCATTCAATTTAAACAACACAAAGGTGCTAAAGTTGGCCAAAAAAAAAAAAATGGCTTCAATGAACTCTAGTGTTCTAGCATGCAGCTATGCCATTTCTGGGGCAGGAGCCTTGGAGCTGAGCTCAAAGGCTTCTTCCGTGGCACCTTTATCTGTTGGGGTTGCTGAGAAACTGCCCTTGATTAAGGCACAAACCCAAAACTCAAGAGAAGAAAAGGGAAATGAAGGAAGAAGAGCTGCTCTTTTTGGCTTAGCTGCTGCCCTTGTTGCAACTTCCCTCAATACTTCCTCTGCTAATGCTGGGATCATTGAGGACTACCTTGAGAAGAGCAAAGCTAACAAGGAGTTGAATGACAAGAAGAGGTTAGCAACAAGTGGGGCCAACTTTGCAAGAGCATACACTGTGCAATTTGGAACCTGCAAATTCCCAGAGAACTTCACAGGCTGCCAAGATCTTGCCAAGCAAAAGAAAGTGCCATTCATCTCTGATGATCTGGATGTGGAATGTGAAGGCAAGGACAAGTACAAGTGCGGTTCTAATGTCTTTTGGAAATGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47198.p1 GENE.R_Transcript_47198~~R_Transcript_47198.p1 ORF type:5prime_partial len:206 (+),score=59.51,PsaN|PF05479.7|1.3e+03,PsaN|PF05479.7|1.3e-66 R_Transcript_47198:2-619(+)
PPNTNKTLLYHNFKPSKENFPFNLNNTKVLKLAKKKKMASMNSSVLACSYAISGAGALELSSKASSVAPLSVGVAEKLPLIKAQTQNSREEKGNEGRRAALFGLAAALVATSLNTSSANAGIIEDYLEKSKANKELNDKKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLDVECEGKDKYKCGSNVFWKW*

Click here to download the sequence:
Link to NCBI Protein BLAST