Transcript Information: R_Transcript_47202.p1


Annotated TAIR IDAT5G64040.2
Annotated Gene Namephotosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN)
Annotated Gene Symbol(s)PSAN
Annotation TypeOrtholog
Chromosome Positionchr5:25628690-25629409 | Reverse length=181
E-Value7.4E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.7224065577656
Replicate 21.3459166933524
Replicate 32.3494089842208
Condition 2: 8 Hour
Replicate 12.3544100910813
Replicate 21.0033729031301
Replicate 30.93085182668651
Condition 3: 24 Hour
Replicate 11.9131506023087
Replicate 20.70689932341594
Replicate 31.1224463941999


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47202.p1 GENE.R_Transcript_47202~~R_Transcript_47202.p1 ORF type:complete len:156 (-),score=50.18,PsaN|PF05479.7|1.1e-45 R_Transcript_47202:354-821(-)
ATGGCTTCAATGAACTCTGGTGTTCTAGCATGCAGCTATGCCATTTCTGGGGCAGGAGCCTTGGAGCTGAACTCAAAGGCTTCTTCTGTGGCACCTTTATCTGTTGGGGTTGCTGAGAAACTGCCCTTGATTAAGGCACAAACCCAAAACTCAAGGGAAGAAAAGGGAAATGAAGGAAGAAGAGCTGCTCTTTTTGGCTTAGCTGCTGCCCTTGTTGCAACTTCCCTCCATACTTCCTCTGCTAATGCTGGGATCATTGAGGACTACCTTGAGAAGAGCAAAGCTAATAAGGAGTTGAATGACAAGAAGAGGTTGGCAACAAGTGGGGCCAACTTTGCAAGAGCATACACTGTGCAATTTGGAACCTGCAAATTCCCAGAGAACTTTACAGGCTGCCAAGATCTTGCCAAGCAAAAGGTTGGTCATGTCACTCATTTACTATGTTATGCCACGTTTGAATTTTGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47202.p1 GENE.R_Transcript_47202~~R_Transcript_47202.p1 ORF type:complete len:156 (-),score=50.18,PsaN|PF05479.7|1.1e-45 R_Transcript_47202:354-821(-)
MASMNSGVLACSYAISGAGALELNSKASSVAPLSVGVAEKLPLIKAQTQNSREEKGNEGRRAALFGLAAALVATSLHTSSANAGIIEDYLEKSKANKELNDKKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKVGHVTHLLCYATFEFC*

Click here to download the sequence:
Link to NCBI Protein BLAST