Transcript Information: R_Transcript_472043.p1


Annotated TAIR IDAT5G23670.1
Annotated Gene Namelong chain base2
Annotated Gene Symbol(s)LCB2
Annotation TypeHomolog
Chromosome Positionchr5:7981889-7985037 | Forward length=489
E-Value4E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.32987278833829
Replicate 20.25296747489516
Replicate 30.13799239515754
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.13830004354039
Replicate 20.13286300536492
Replicate 30.2637072853843


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_472043.p1 GENE.R_Transcript_472043~~R_Transcript_472043.p1 ORF type:5prime_partial len:166 (+),score=18.08,Aminotran_1_2|PF00155.17|1.7e-25 R_Transcript_472043:1-498(+)
CGAGTTGATATTATAAACTCCACTTTTGGTAAATCACTCGGTGGTGCAAGCGGTGGATATACCACTTCCTCGTCCGAAGTAATTGATCTTCTTCGACAACGAGCACGTCCATACCTCTTCTCAAACACGATTGCACCTTCAGTCGCTGCTGCTGCTTCAAAGGCGATTGAATTAGTTGATAAGAAACCGGAATTAATTGAACGTCTCTCCGGTTACACCTCTTATTTCAGAAATTCGTTGACTAATGCTGGATTTACATTACGAGGAAAAGATCATCCAATTGTGCCTGTTATGTTAGGTGATGCTCGATTAGCATCTGAATTTGCTGATGAAATGTTAGCCGAAGGTATTTATGTGATTGGATTCAGTTATCCAGTAGTTCCAAAAGGCCTCGCTCGAATTAGAGTTCAATTATCAGCTGCTCACAGCAAAGAGGATTTAGATAAATGCATCAATGCCTTTATTAAGATCGGTAAAGCGAAAGGTGTAATCAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_472043.p1 GENE.R_Transcript_472043~~R_Transcript_472043.p1 ORF type:5prime_partial len:166 (+),score=18.08,Aminotran_1_2|PF00155.17|1.7e-25 R_Transcript_472043:1-498(+)
RVDIINSTFGKSLGGASGGYTTSSSEVIDLLRQRARPYLFSNTIAPSVAAAASKAIELVDKKPELIERLSGYTSYFRNSLTNAGFTLRGKDHPIVPVMLGDARLASEFADEMLAEGIYVIGFSYPVVPKGLARIRVQLSAAHSKEDLDKCINAFIKIGKAKGVIN*

Click here to download the sequence:
Link to NCBI Protein BLAST