Transcript Information: R_Transcript_47210.p1


Annotated TAIR IDAT2G44920.2
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:18524419-18526502 | Forward length=224
E-Value1.4E-99
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.127227679978
Replicate 213.966702039035
Replicate 315.540253699592
Condition 2: 8 Hour
Replicate 113.914874793809
Replicate 210.835669614671
Replicate 314.793162840404
Condition 3: 24 Hour
Replicate 117.79988578007
Replicate 214.573959619324
Replicate 315.427457048033


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47210.p1 GENE.R_Transcript_47210~~R_Transcript_47210.p1 ORF type:complete len:227 (+),score=47.89,Pentapeptide|PF00805.18|0.011,Pentapeptide|PF00805.18|7.2e-12,Pentapeptide|PF00805.18|15,Pentapeptide_4|PF13599.2|1.2e-08,Pentapeptide_4|PF13599.2|25,Pentapeptide_3|PF13576.2|0.00018,Pentapeptide_3|PF13576.2|0.0012 R_Transcript_47210:230-910(+)
ATGGCAGCACTGAACGTCTCCTTCAGTCTGAAAATCCCACAAAAAGCCCATGTCCCTCTTCCCAGATCTTATCCATTGTCTATTCAATCCCAATTGCATCCTTCTCATTCTGAACCTCAACATTTGGAATTATCTGACAATTGTAAGAAGCATGGATCTTTGTTATCAAATTTGGCAGATCCAACTGCTACTGCAAGCTTTATTGCCCTTCTCTCTGCTTCACTTTGCTTTGTCCACCCTGCTCTTGCTTTCAAGGGAGGAGGGCCATATGGGCAGGGAGTAACAAGAGGTCAGGATTTGTCTGGCAAGGATTTTAGTGGAAAGACCTTGATCAAGCAAGACTTCAAGACGTCAATATTGCGGATGGCAAATTTTAAAGGAGCTAAATTGCTGGGGGCTAGCTTTTTTGATGCAGATTTAACAGGGGCTGACCTATCGGATGCTGATCTAAGAGGAGCAGACTTTTCCTTGGCAAATGTGACAAAGGCAAATTTAACCAATGCTAACTTGGAAGGAGCTCTAGCTACTGGCAACACATCATTTAAAGGATCAGTCATAACAGGAGCAGACTTCACTGATGTGCCTCTGAGAGATGATCAACGAGAATACCTTTGCAAAGCAGCTGATGGGGTGAATCCAACGACTGGAAATGCCACACGAGATTCCCTCTTTTGCAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47210.p1 GENE.R_Transcript_47210~~R_Transcript_47210.p1 ORF type:complete len:227 (+),score=47.89,Pentapeptide|PF00805.18|0.011,Pentapeptide|PF00805.18|7.2e-12,Pentapeptide|PF00805.18|15,Pentapeptide_4|PF13599.2|1.2e-08,Pentapeptide_4|PF13599.2|25,Pentapeptide_3|PF13576.2|0.00018,Pentapeptide_3|PF13576.2|0.0012 R_Transcript_47210:230-910(+)
MAALNVSFSLKIPQKAHVPLPRSYPLSIQSQLHPSHSEPQHLELSDNCKKHGSLLSNLADPTATASFIALLSASLCFVHPALAFKGGGPYGQGVTRGQDLSGKDFSGKTLIKQDFKTSILRMANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANLTNANLEGALATGNTSFKGSVITGADFTDVPLRDDQREYLCKAADGVNPTTGNATRDSLFCK*

Click here to download the sequence:
Link to NCBI Protein BLAST