Transcript Information: R_Transcript_47230.p1


Annotated TAIR IDAT5G25360.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:8799934-8802333 | Reverse length=169
E-Value5.6E-76
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.60478662905
Replicate 224.236470233628
Replicate 327.997123728631
Condition 2: 8 Hour
Replicate 118.742266996657
Replicate 225.25951467245
Replicate 324.426241452126
Condition 3: 24 Hour
Replicate 124.516670681437
Replicate 226.684140386131
Replicate 320.53661180499


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47230.p1 GENE.R_Transcript_47230~~R_Transcript_47230.p1 ORF type:complete len:162 (+),score=15.90,DUF4050|PF13259.2|7.3e-12,DUF4050|PF13259.2|6.2e-14 R_Transcript_47230:343-828(+)
ATGCATGGGAGCAGAGGTTGTCTTGGATGTTGTACTACTACTAAGCCCCAACTAATTATTGCCGTGGATGAGCCATCAAAAGGACTCAAAATTCAAGGCCGATCAGTAAAGAAAACTAACATATCGGAGGATCTCTGGAGCACTAGCACATATGAAATGGACAACAGTGCAGTTCAATCACAGAGGAGCATTTCATCAATGAGTGCGTCAAACCAGAACCATGATCCCAACAGTACTAGTGCCAGCACAAGCAATCCTTCTGAATTCATAAACCACGGCCTTCTTCTCTGGAATCAGGTACGGCAGCAATGGATTGGAGATAGAAAGACTCGTGACCAACCAATAACACGAGAACCCAGATTGAGTTGGAATGCTACTTACGAGAGTCTACTTGGGACAAATAAGCCATTTCCACAACCTATTCCTCTTCCCGAAATGGTAGATTTTCTTGTTGATGTCTGGGAACAAGAAGGCCTGTATGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47230.p1 GENE.R_Transcript_47230~~R_Transcript_47230.p1 ORF type:complete len:162 (+),score=15.90,DUF4050|PF13259.2|7.3e-12,DUF4050|PF13259.2|6.2e-14 R_Transcript_47230:343-828(+)
MHGSRGCLGCCTTTKPQLIIAVDEPSKGLKIQGRSVKKTNISEDLWSTSTYEMDNSAVQSQRSISSMSASNQNHDPNSTSASTSNPSEFINHGLLLWNQVRQQWIGDRKTRDQPITREPRLSWNATYESLLGTNKPFPQPIPLPEMVDFLVDVWEQEGLYD*

Click here to download the sequence:
Link to NCBI Protein BLAST