Transcript Information: R_Transcript_47234.p1


Annotated TAIR IDAT5G25360.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:8799934-8802333 | Reverse length=169
E-Value9.4E-75
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.899929136268
Replicate 213.324575264189
Replicate 314.867353728272
Condition 2: 8 Hour
Replicate 19.5353608688791
Replicate 210.642919722487
Replicate 314.486381552809
Condition 3: 24 Hour
Replicate 112.472270272743
Replicate 29.4371059676028
Replicate 315.258255671154


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47234.p1 GENE.R_Transcript_47234~~R_Transcript_47234.p1 ORF type:complete len:208 (+),score=18.61,DUF4050|PF13259.2|5.7e-09,DUF4050|PF13259.2|9.5e-14 R_Transcript_47234:771-1394(+)
ATGAATTCAAGATGTTGTTTGATGATTGAAATTGACAAATGTGTGGCAAGGAAGCCATGCTGTTCATTTTTGGGTCTTTATTTCGCTTACTTTAGTGTTCTTACTCGCTTGGCGATGGAAAAGCTTAAAAACTTATTCAAGAGCCTTTTCAGTAGCAGAGGTTGTCTTGGATGTTGTACTAAGCCCCAACTAATTATTGCCGTGGATGAGCCATCAAAAGGACTCAAAATTCAAGGCCGATCAGTAAAGAAAACTAACATATCGGAGGATCTCTGGAGCACTAGCACATATGAAATGGACAACAGTGCAGTTCAATCACAGAGGAGCATTTCATCAATGAGTGCGTCAAACCAGAACCATGATCCCAACAGTACTAGTGCCAGCACTAGCAATCCTTCTGAATTCGTAAACCACGGCGTTCTTCTCTGGAATCAGGTAAGGCAGCAATTTGTTGGAGATAGAAAGACTCGTGACCAACCAATAACACGAGAACCCAGATTGAGTTGGAATGCTACTTACGAGAGTCTACTTGGGACAAATAAGCCATTTCCACAACCTATTCCTCTTCCCGAAATGGTAGATTTTCTTGTTGATGTCTGGGAACAAGAAGGCCTGTATGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47234.p1 GENE.R_Transcript_47234~~R_Transcript_47234.p1 ORF type:complete len:208 (+),score=18.61,DUF4050|PF13259.2|5.7e-09,DUF4050|PF13259.2|9.5e-14 R_Transcript_47234:771-1394(+)
MNSRCCLMIEIDKCVARKPCCSFLGLYFAYFSVLTRLAMEKLKNLFKSLFSSRGCLGCCTKPQLIIAVDEPSKGLKIQGRSVKKTNISEDLWSTSTYEMDNSAVQSQRSISSMSASNQNHDPNSTSASTSNPSEFVNHGVLLWNQVRQQFVGDRKTRDQPITREPRLSWNATYESLLGTNKPFPQPIPLPEMVDFLVDVWEQEGLYD*

Click here to download the sequence:
Link to NCBI Protein BLAST