Transcript Information: R_Transcript_472348.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value3E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.31470622335722
Replicate 20.18100258979567
Replicate 30
Condition 2: 8 Hour
Replicate 10.21108504264867
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.18868710936981


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_472348.p1 GENE.R_Transcript_472348~~R_Transcript_472348.p1 ORF type:5prime_partial len:116 (+),score=18.06,zf-RVT|PF13966.2|1.1e-09,zf-RVT|PF13966.2|6.9e+02 R_Transcript_472348:2-349(+)
TGGATGTTGGCTTTGAATAGGATCAATACTAATGATGTGAGGCAGCGACACCACCCTAATATGGCCATCTCACCTGATTTGTGTGTCATGTGTCATAAAGCGCGGGAGACGACAACTCACTTGTTTTTGGGATGTGATGTAGCTGGGGGTATTTGGAGTAGGTTGTTTGCTATTCGTGGAGAATCTTGGGCTTGTCCACAAGGCTTAATGGAGTTTCTACAACTTAGATTTTTGGGTTTCGAGAAGGGACGGGAGAAGAACATGCTTTGGCGCAATGCGACTTTGGCTACTCTTTGGAGCATTTGGCTGGAATGGAATGGGAGAGTTTTCTTCAATCCCCTCCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_472348.p1 GENE.R_Transcript_472348~~R_Transcript_472348.p1 ORF type:5prime_partial len:116 (+),score=18.06,zf-RVT|PF13966.2|1.1e-09,zf-RVT|PF13966.2|6.9e+02 R_Transcript_472348:2-349(+)
WMLALNRINTNDVRQRHHPNMAISPDLCVMCHKARETTTHLFLGCDVAGGIWSRLFAIRGESWACPQGLMEFLQLRFLGFEKGREKNMLWRNATLATLWSIWLEWNGRVFFNPLP*

Click here to download the sequence:
Link to NCBI Protein BLAST