Transcript Information: R_Transcript_47253.p1


Annotated TAIR IDAT4G15520.1
Annotated Gene NametRNA/rRNA methyltransferase (SpoU) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:8862829-8864366 | Forward length=222
E-Value1.9E-119
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.252960954719
Replicate 213.111226897514
Replicate 316.304795756213
Condition 2: 8 Hour
Replicate 119.995007620676
Replicate 222.55617338565
Replicate 323.383079183468
Condition 3: 24 Hour
Replicate 130.677244592478
Replicate 225.329838813196
Replicate 323.894874112333


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47253.p1 GENE.R_Transcript_47253~~R_Transcript_47253.p1 ORF type:complete len:229 (+),score=36.03,SpoU_methylase|PF00588.15|1.6e-28 R_Transcript_47253:80-766(+)
ATGACCGAAACGAAGCAAGGAGGAGGAATAGAGAGCTACGTGGTGGTACACAACATCGCCAAGCGCCACAACGTGGGCACCTTAGCCCGTAGCGCCACCGCCTTCGGCGTATCAGAACTCATCCTTGTTGGCCGTCGAGACTTCAACGCTTTCGGAAGTCACGGCTCCACTTCTCACCTTAAGTTCCGCCATTTCTTCTCTCTCACTGACGCTCGTAACTTCCTCAAGGATAGAGATTGTGATATATGTGGTGTGGAGATTACGGACAATGCGATGCCCGTGAATCAGCATCCTTTTCGCAAGAGTACTGCGTTTTTGCTCGGGAATGAGGGAACAGGTCTCTCAACAAAGGAATCTGAGATATGCGACTTCTTTGTTTATATTCCACAATATGGGTGTGGGACAGCCTCACTGAATGTTACTGTGGCAGCATCTATTGTCCTTCATCATTTTGGTGTGTGGGCTGGATTTTCTGAGAGGAACCGTGAAGGGAGCAAATTTGTTGTGGCTGAGAAGCCTGTGAGACAAACAGGGCGGACTTTTTGTGCAGAATCACAAGATGCTATCTTAGAGGAGCGTCGTCTGAGGAGGGAAAATGCTGCAAATGGATTATTTGGTGAAAGTGGGGATGGAGATGTGCCTGTCAACCTTCTGGATACACTCTTTGATAATTCAGAGGAAAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47253.p1 GENE.R_Transcript_47253~~R_Transcript_47253.p1 ORF type:complete len:229 (+),score=36.03,SpoU_methylase|PF00588.15|1.6e-28 R_Transcript_47253:80-766(+)
MTETKQGGGIESYVVVHNIAKRHNVGTLARSATAFGVSELILVGRRDFNAFGSHGSTSHLKFRHFFSLTDARNFLKDRDCDICGVEITDNAMPVNQHPFRKSTAFLLGNEGTGLSTKESEICDFFVYIPQYGCGTASLNVTVAASIVLHHFGVWAGFSERNREGSKFVVAEKPVRQTGRTFCAESQDAILEERRLRRENAANGLFGESGDGDVPVNLLDTLFDNSEEN*

Click here to download the sequence:
Link to NCBI Protein BLAST