Transcript Information: R_Transcript_47262.p1


Annotated TAIR IDAT1G06550.1
Annotated Gene NameATP-dependent caseinolytic (Clp) protease/crotonase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:2003834-2006564 | Reverse length=387
E-Value8.2E-206
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1107.2897047667
Replicate 2125.92851540761
Replicate 3111.63001701787
Condition 2: 8 Hour
Replicate 1112.37057739874
Replicate 2109.75728622047
Replicate 3124.80297536881
Condition 3: 24 Hour
Replicate 1171.96798794273
Replicate 2206.72922241802
Replicate 3122.07790219734


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47262.p1 GENE.R_Transcript_47262~~R_Transcript_47262.p1 ORF type:complete len:426 (+),score=82.45,ECH_2|PF16113.1|2.9e-108,ECH_1|PF00378.16|4.3e-29 R_Transcript_47262:624-1901(+)
ATGCTTTCATTTTATAAACAACTCCATACATGTTCTTTCTTAGCTACCAAAATCACAACCCATCTGTCCCGTTCCTCTTACTGTCCATTGGCTTATTTTGGGACTTCATCGAAAATGGCACAAATGACAAACTCTGATGAACCAGTTGTTCTTGGAGAGGAAGTAGGCCGTGTGAGATTGGTTACATTGAATCGTCCTCGTCAACTCAATGTGATTTCATCTGAAACGGTGAAAATGTTGGCAGGATACTTGGAAAACTGGGAGAAGGATGACAATGCTGAACTTATACTAATCAAGGGAGCAGGTCGTGCGTTTTCAGCAGGAGGAGATCTACGTATGTTCTATGAGGGCAAGAAAACAAAGGACTCTTGCCTTGAAGTGGCTTACAGGATGTACTGGCTTTGCCATCATATACACAGCTACAAGAAAACTCAGGTTGCTCTAGCTAATGGAATTTCCATGGGTGGAGGTGCCTCTTTGATGGTTCCAATGAAATTTTCGGTTGTGACAGAAAAAACTGTTTTTGCCACTCCTGAAGCTGGTATCGGATTTCATACTGACTGCGGCTTCTCATACATACATTCACGATTGCCTGGTCGTTTAGGTGAATACTTGGCTTTGACTGGAGCAAGATTGAATGGCAAGGAATTGGTTGCAGCTGGACTGGCTGCCCATTTTGTGCCTTCAGAGAAATTGGCTGAGCTGGAGAAGAGCCTGGTGAGCTTGAACAAGGGTGACAAGGATGCAGTCAAGTCATTGATTGAAGAGTTCTCTTTGGAAGTTGAGATTGATGCAGATAGTATTTTGAACAAGCAATCTATTATTGATGAATGCTTTTCCAAGGATTCAGTGGAAGAGATTATTCAAGCCTGCGAAGCTGAGACGTTCAAAGAAGGAAATGGATGGATGGGCCCAGTACTTAAGGGTTTAAAAAGATCATCTCCAACTGGACTAAAGATGACTCTACGATCGATACGCAAAGGACGGAATCAAACGCTGGCTGAGTGCCTCAAAAAAGAGTTCAGACTGACAATAAACACTTTACGGTGTACTATATCTTCTGATATGTATGAGGGTATCAGAGCTCTCACCATTGACAAGGATAACACTCCCAAGTGGGATCCACCAAGCCTTGACAAAGTAAAGGATGAGGACTTAGACTTAGTATTTCAGCCATACGAAACTCATCTGGAACTTCAGATCCCAGAAAAGGAAGAATGCAGGTGGGATGGAAAGTACGAGAAATCTGCTTATGCGACAGCAAAGGCAACAGAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47262.p1 GENE.R_Transcript_47262~~R_Transcript_47262.p1 ORF type:complete len:426 (+),score=82.45,ECH_2|PF16113.1|2.9e-108,ECH_1|PF00378.16|4.3e-29 R_Transcript_47262:624-1901(+)
MLSFYKQLHTCSFLATKITTHLSRSSYCPLAYFGTSSKMAQMTNSDEPVVLGEEVGRVRLVTLNRPRQLNVISSETVKMLAGYLENWEKDDNAELILIKGAGRAFSAGGDLRMFYEGKKTKDSCLEVAYRMYWLCHHIHSYKKTQVALANGISMGGGASLMVPMKFSVVTEKTVFATPEAGIGFHTDCGFSYIHSRLPGRLGEYLALTGARLNGKELVAAGLAAHFVPSEKLAELEKSLVSLNKGDKDAVKSLIEEFSLEVEIDADSILNKQSIIDECFSKDSVEEIIQACEAETFKEGNGWMGPVLKGLKRSSPTGLKMTLRSIRKGRNQTLAECLKKEFRLTINTLRCTISSDMYEGIRALTIDKDNTPKWDPPSLDKVKDEDLDLVFQPYETHLELQIPEKEECRWDGKYEKSAYATAKATE*

Click here to download the sequence:
Link to NCBI Protein BLAST