Transcript Information: R_Transcript_47265.p2


Annotated TAIR IDAT1G06550.1
Annotated Gene NameATP-dependent caseinolytic (Clp) protease/crotonase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:2003834-2006564 | Reverse length=387
E-Value1.1E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0737035855717
Replicate 20.30876912376909
Replicate 30.33686378817871
Condition 2: 8 Hour
Replicate 10.54012937383629
Replicate 20.82209124416124
Replicate 30.80080635089942
Condition 3: 24 Hour
Replicate 10.67522962434424
Replicate 20.64868408501698
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47265.p2 GENE.R_Transcript_47265~~R_Transcript_47265.p2 ORF type:complete len:136 (+),score=15.31,ECH_2|PF16113.1|1.9e-17,ECH_1|PF00378.16|1.5e-10 R_Transcript_47265:624-1031(+)
ATGCTTTCATTTTATAAACAACTCCATACATGTTCTTTCTTAGCTACCAAAATCACAACCCATCTGTCCCGTTCCTCTTACTGTCCATTGGCTTATTTTGGGACTTCATCGAAAATGGCACAAATGACAAACTCTGATGAACCAGTTGTTCTTGGAGAGGAAGTAGGCCGTGTGAGATTGGTTACATTGAATCGTCCTCGTCAACTCAATGTGATTTCATCTGAAACGGTGAAAATGTTGGCAGGATACTTGGAAAACTGGGAGAAGGATGACAATGCTGAACTTATACTAATCAAGGGAGCAGGTCGTGCGTTTTCAGCAGGAGGAGATCTACGTATGTTCTATGAGGGCAAGAAAACAAGTAAGTATTGTGTCCATCCTTTGATGTGCTTTTCATCGTTGATATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47265.p2 GENE.R_Transcript_47265~~R_Transcript_47265.p2 ORF type:complete len:136 (+),score=15.31,ECH_2|PF16113.1|1.9e-17,ECH_1|PF00378.16|1.5e-10 R_Transcript_47265:624-1031(+)
MLSFYKQLHTCSFLATKITTHLSRSSYCPLAYFGTSSKMAQMTNSDEPVVLGEEVGRVRLVTLNRPRQLNVISSETVKMLAGYLENWEKDDNAELILIKGAGRAFSAGGDLRMFYEGKKTSKYCVHPLMCFSSLI*

Click here to download the sequence:
Link to NCBI Protein BLAST