Transcript Information: R_Transcript_47305.p1


Annotated TAIR IDAT5G40690.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16290770-16291402 | Forward length=210
E-Value4.2E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.282996846014
Replicate 221.097731819275
Replicate 325.673251798586
Condition 2: 8 Hour
Replicate 122.120080894371
Replicate 232.839169467248
Replicate 327.271260400678
Condition 3: 24 Hour
Replicate 111.534357254499
Replicate 212.785657327871
Replicate 313.322950678981


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47305.p1 GENE.R_Transcript_47305~~R_Transcript_47305.p1 ORF type:complete len:207 (+),score=34.11 R_Transcript_47305:156-776(+)
ATGAAGAGAGAAGGTCGTCAACACGGAATGGTCCGAACCTTCCATGTTCTACCGGCCCCATTGAACCCGAGGCCCCATACCCGAATAGTCAATCGGGTTGATTCCCCACCCACTGCCGGAATATTCACAAAGGTCTCTCGTAAGCCCACCAACCACTCTAAGTTCACCGGCAAGTGCGACCGTCCTAACTGTACAGCCTGCCATATACATGCTGGTTGCAAGTCTAAACACAAGGCTAAAGGCACCCAGAAAATTAGATCCTCCGACGCCGTTTTGAATTACAAGCATGTTACTTGGCGGGCCATGGATCACTTTTCCGGCCCCACCCGTAAGCTTCCGGTTTCTGGGTACTCCGCTTCTCAGATCCTAGACGAGCTTGCCAACGATTATATGGGCTGTCGTGATGATGATGATTATTATTACAATGATGATGAGGAGTTATATGAAAATGCAACCACTGAAGATCATGATCAAGATCATGAGAATGAGGAAGAGCAAGAGCAAATTCAGCAGGATGATGTTGGGATTGATGATGGTGAAATGGATTACTATGATGTCATGGTTGTGTGGGATCCAGTTGATGGGGATGATGGTTGGTCTATCGTTGGAGGAGTTATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47305.p1 GENE.R_Transcript_47305~~R_Transcript_47305.p1 ORF type:complete len:207 (+),score=34.11 R_Transcript_47305:156-776(+)
MKREGRQHGMVRTFHVLPAPLNPRPHTRIVNRVDSPPTAGIFTKVSRKPTNHSKFTGKCDRPNCTACHIHAGCKSKHKAKGTQKIRSSDAVLNYKHVTWRAMDHFSGPTRKLPVSGYSASQILDELANDYMGCRDDDDYYYNDDEELYENATTEDHDQDHENEEEQEQIQQDDVGIDDGEMDYYDVMVVWDPVDGDDGWSIVGGVM*

Click here to download the sequence:
Link to NCBI Protein BLAST