Transcript Information: R_Transcript_47308.p1


Annotated TAIR IDAT3G53630.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G18692.1); Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19883986-19885568 | Forward length=194
E-Value5E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.441525854096
Replicate 220.312699937628
Replicate 317.259960421287
Condition 2: 8 Hour
Replicate 121.752559092669
Replicate 223.816939263402
Replicate 324.905698293089
Condition 3: 24 Hour
Replicate 118.793367777097
Replicate 225.132736875309
Replicate 324.02557351678


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47308.p1 GENE.R_Transcript_47308~~R_Transcript_47308.p1 ORF type:complete len:215 (+),score=47.59 R_Transcript_47308:57-701(+)
ATGAGCTCTATCAGCAGCAGTACCCCAAACTTTGACAACCTCCTTCTCCAATCCTTAATGGGTCGACTTCAAATCCGGCCTCCACCAACATCCAACCACCATCAAAACAACCATCCTCTCTTCTCTCAATCCTTCGAAGACCTCTTACTCGATGCTGCCAATAACTACCGCTTCTCAAACTCAGACGAAGAAGATGAAGAAGACGACAACAATATCGACGGGCCCAGGAAGTCCGAGCTCGCCAAGGAAGAGTGTAAGCTCGAAAAGGAGTTGATCAAGATCATACTTAGTGGGAGAACCGAAACGCTGAAACCCAATTCAGGCCAGGCAGTTGCTATTGGGGAACACCACATTTGTGTCGGGTTTCATGAGGAAACAGGTTCGGAGTATCGGGTTTGGGAGTGGCATGGGCATATTATGTTGTTTGATGAAGAGAATGGGTACACCCCTGAGTATATCTATGGGAATTATTTTGAGAGGTCGTTGTTGGGTAAAGGGAGGGGTGTGGTTTCCAAGAAGGTGGAAGAACAAGAGGGTGAAGAAAAAGTTGAGAATTTAGGGTTGAGGGAACTGATTGAAAATGGGGATTCTGCAAGTACTAGGATTCTTCATCGTGGCAGGAGAAGTGCTGCTTCTCCAAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47308.p1 GENE.R_Transcript_47308~~R_Transcript_47308.p1 ORF type:complete len:215 (+),score=47.59 R_Transcript_47308:57-701(+)
MSSISSSTPNFDNLLLQSLMGRLQIRPPPTSNHHQNNHPLFSQSFEDLLLDAANNYRFSNSDEEDEEDDNNIDGPRKSELAKEECKLEKELIKIILSGRTETLKPNSGQAVAIGEHHICVGFHEETGSEYRVWEWHGHIMLFDEENGYTPEYIYGNYFERSLLGKGRGVVSKKVEEQEGEEKVENLGLRELIENGDSASTRILHRGRRSAASPS*

Click here to download the sequence:
Link to NCBI Protein BLAST