Transcript Information: R_Transcript_473153.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value6E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.62226003254723
Replicate 20.35789148436872
Replicate 30.13015191815996
Condition 2: 8 Hour
Replicate 10.41737269796441
Replicate 20.38115139502021
Replicate 30.4125366050088
Condition 3: 24 Hour
Replicate 10.78265251912628
Replicate 20.37594191290757
Replicate 30.74617175068968


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_473153.p1 GENE.R_Transcript_473153~~R_Transcript_473153.p1 ORF type:complete len:176 (+),score=20.98,zf-RVT|PF13966.2|3.2e-21 R_Transcript_473153:676-1203(+)
ATGAACATCAGGAACTCAGGTATTGCTAACAATGGTACTTGGCCTATCTCTCCTAAAGGCAAATATTCCATTAAGAAGGCATATCATATCATGATGGGCTCTCATGAGAAATGCTGGTTTGCTGCTATGGTATGGGGTAGATACACAATGCCTAAACATGCTCTTTTTATGTGGTTGGCTACTCAAGCCAGGCTGTTGACTAAAGACAGGCTGATTAATTTCAAAATGCAAGGCATAGACCCTCTTTGTGTGTTCTGTCAGCAAGATGCAGAAACCCATGCACACTTATTCTTCAAGTGCCAATTTTCAGCTGCTGTTTTGAAGATTATAGGCCAATGGTTACAAATAGGGTGCTGTCAAGTGGAGTATGGCAAATGGCCACTCTGGATTACCAGGAGGAAACAAAATAAATACAGGAAATGGATCTATTATGCAGGGGTGGCAGCCTCTATATATTACATTTGGAGAAGCAGGAACCTCATCATTTTCCAGAACCAGAGTTGCAAACCTGAAGATATAGCTGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_473153.p1 GENE.R_Transcript_473153~~R_Transcript_473153.p1 ORF type:complete len:176 (+),score=20.98,zf-RVT|PF13966.2|3.2e-21 R_Transcript_473153:676-1203(+)
MNIRNSGIANNGTWPISPKGKYSIKKAYHIMMGSHEKCWFAAMVWGRYTMPKHALFMWLATQARLLTKDRLINFKMQGIDPLCVFCQQDAETHAHLFFKCQFSAAVLKIIGQWLQIGCCQVEYGKWPLWITRRKQNKYRKWIYYAGVAASIYYIWRSRNLIIFQNQSCKPEDIAA*

Click here to download the sequence:
Link to NCBI Protein BLAST