Transcript Information: R_Transcript_473327.p1


Annotated TAIR IDAT3G20980.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7355963-7357966 | Forward length=405
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.1665705098452
Replicate 20.30422968491409
Replicate 30.12348034435637
Condition 3: 24 Hour
Replicate 10.15617555937214
Replicate 20
Replicate 30.148895950251


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_473327.p1 GENE.R_Transcript_473327~~R_Transcript_473327.p1 ORF type:internal len:147 (+),score=16.84 R_Transcript_473327:1-438(+)
CAGCCAATGGTATCTTGCACCACCACACCAAAAGAAATAGCTCTTGCCGTTACAAATGGAAAGTTAATCAATTACAAAGATGATTGGATTATTGATTCTGGGGCTTCTGATCATATGGTAGCAGATTTGAACAGATTGAGTAATGTGAAACCTATGAGGGTAAAATCCAAAATAAATTTACCTAATGGAGGTATAGCTTGTGTCACTCATATTGGTGATGCTAAATTAGAAAATGGGATGACTCTAAAAAATGTCCTATATGTTCCAGAGTTTAAACAAAATCTCTTGTCGGTTCATAAATTGTTGATAGATGAAAAGTGCCAAGTAATATTTAACAGAACTGACTGTATCATGCTGGATCGCACAACAAAGAGCACTAAAGGAATTGGAAGGGCAGTTAGTGGTCTTTACTACCTCACAAACGAACCAGAAAAGAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_473327.p1 GENE.R_Transcript_473327~~R_Transcript_473327.p1 ORF type:internal len:147 (+),score=16.84 R_Transcript_473327:1-438(+)
QPMVSCTTTPKEIALAVTNGKLINYKDDWIIDSGASDHMVADLNRLSNVKPMRVKSKINLPNGGIACVTHIGDAKLENGMTLKNVLYVPEFKQNLLSVHKLLIDEKCQVIFNRTDCIMLDRTTKSTKGIGRAVSGLYYLTNEPEKK

Click here to download the sequence:
Link to NCBI Protein BLAST