Transcript Information: R_Transcript_47347.p1


Annotated TAIR IDAT3G60860.1
Annotated Gene NameSEC7-like guanine nucleotide exchange family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:22484804-22491510 | Forward length=1793
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.762755546431
Replicate 211.159773729354
Replicate 317.988112958942
Condition 2: 8 Hour
Replicate 116.879268864916
Replicate 217.085559465937
Replicate 324.671207519176
Condition 3: 24 Hour
Replicate 124.58393188912
Replicate 219.361392913424
Replicate 324.10943488936


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47347.p1 GENE.R_Transcript_47347~~R_Transcript_47347.p1 ORF type:complete len:1793 (+),score=334.58,Sec7|PF01369.16|1.4e-69,Sec7|PF01369.16|7.7e+03,Sec7|PF01369.16|4.5e+03,Sec7_N|PF12783.3|1.3e-44,Sec7_N|PF12783.3|7.7e+03,Sec7_N|PF12783.3|2.9e+03,Sec7_N|PF12783.3|8.3e+02,Sec7_N|PF12783.3|1.1e+02,DCB|PF16213.1|2.1e-41,DCB|PF16213.1|1.1e+03,DUF1981|PF09324.6|2.3e+02,DUF1981|PF09324.6|4.7e+03,DUF1981|PF09324.6|9e+02,DUF1981|PF09324.6|67,DUF1981|PF09324.6|8.6e-32,Mon2_C|PF16206.1|3.8e-11 R_Transcript_47347:421-5799(+)
ATGGCTTCTTCGGAAGCCGATTCCCGTCTTAAGCTGGTATTGGCCCCTTCTTTAGAGAAGATAATCAAGAATGGGTCATGGCGAAAGAACTCGAAGCTCGTTCACGAGTGTAAATCTCTTCTCGAGAAGCTCAATTCTAATCCCCACTCTCTCTCCTCCCCCGATTCTCCTACTTCCGAATCCGGAGCTCCGGGCCCGGTCCACGATGGTGGTGCTCATGAGTACTCCATGTCGGATTCTGACGTCATCTTGTCTCCTTTTATTAACGCTTGTTGTTCCGGTAATGTTAAGATCGCTGATGCTGGCCTTGATTGTATTCAGAAACTCATCGCTCATGGTTATCTCCGAGGTGAGGCTGACCTGGCCGGGTCAAACCCTGAATCGAAGCTGTTGAACCGAGTTATTGACTCGGTTTGTAAGTGTATTGAGATTAATGACGAAAATATTGAGCTTAATGTTCTCAAAACCCTACTTTCTGCCGTTACTTCGACTAGTCTTAGAATTCACGGTGATTGTTTGTTACAGATTGTTAGGACTTGTTATGATATTTATTTAGGGAGTAAGAATGTGGTGAATCAGACCACGGCAAAAGCGTCGTTGATCCAGATGCTCGTGATCGTTTTCCGGCGAATGGAGGCCGATTCGTCCACTGTACCCGTCCAGCCGATCGTTGTGGCCGAGCTCATGGAGCCGCCGGAGAAGTCCGATGCTGATCCCGGGATGACGCAGTTCGTGCAAGGGTTCATCACCAGGATTATGCAGGACATTGATGGTGTGTTGAACCCTGTGGCATTGCCTGAAAAGGGTGGTGGTGGGGCCGCGGTTCATGATGGGGCGTTTGAGACGAGGATTAATGCCACGGTGGAGGGGACTAATCCGGCAGATTTGTTGGATTCTACCGATAAGGATATGTTGGATGCCAAGTATTGGGAGATTAGTATGTATAAGTCGGCATTAGAAGGGAGGAAAGGGGAGTTGGCTGACGGGGAAGAAGGGGCTGCGGCCGCGGTGGCGGGGATGGTGGAGAGAGATGATGATTTGGAGGTTCAGATTGGGAACAAGTTGAGGCGGGACGCGTTCTTGGTGTTTCGGGCTCTTTGTAAGTTGTCCATGAAGACTCCCCCTAAAGAGGCATTGCAGGATCCTCAGCTTATGAGGGGGAAGATTGTTGCCCTTGAGTTGCTCAAGATTTTGTTGGAGAATGCTGGCGCCATCTTTAGGACCAGTGACAGATTTTTGGGTGCTATCAAGCAGTACCTCTGTTTGTCATTGCTTAAGAACAGCGCTTCAACTTTGATGATTGTTTTCCAGCTTTCATGCTCCATCTTTATGAGTTTGGTAGCAAGATTTAGAGCAGGCCTGAAGGCAGAAATTGGGGTTTTCTTCCCTATGATAGTCCTTAGAGTTCTGGAAAATGTAGCTCAACCAAATTTTCAGCAGAAGATGATAGTGCTGCGATTTTTGGAAAAACTCTGTGAAGATTCCCAGATATTGGTGGACATATTCATTAATTATGACTGTGATGTCAATTCATCTAACATATTTGAGAGAATGGTCAATGGCCTTCTTAAAACTGCTCAAGGTGTCCCACCTGGGGTTACCACCACATTGTTGCCACCACAAGAAGTCACTCTTAAATTTGAAGCAATGAAGTCTTTGGTGGCTGTTCTAAAATCCATGGGGGACTGGATGAACCGACAATTGCGGATCCCAGATCCTCATTCAGCAAAGAGGTATGAACCAGCTGAGAACAGTCCTGAAGTTGGTAGTCCTCATCTGGCAAATGGAAATGGGGATGAGGCTTCAGAAGGATCTGATGTTCCTTCTGAATCTTCGAATGACATCTCGGACGTGCAAACAATTGAGCAGCGCCGAGCATACAAGCTGGAACTTCAGGAAGGTATATCTCTTTTCAATAGGAAACCAAAAAAGGGGATTGAGTTCCTTATCAATGCTAATAAGGTGGGGAGTTCACCAGAGGAAATAGCCACATTTCTTAAAGATGCTTCTGGTCTGAACAAGACTTTGATTGGTGATTATCTTGGGGAAAGAGAAGAAATGTCATTGAAAGTTATGCATTCATATGTTGATTCCTTTGACTTCCAAGGAAAGCAGCTAGATGAAGCAATTAGGGTTTTTCTCCAAGGTTTTAGATTGCCTGGTGAGGCCCAGAAGATTGACCGGATCATGGAGAAATTTGCTGAACGTTACTGGAAATGTAATCCAAAAGCATTCTCCAGTGCAGACACTGCCTATGTCCTTGCCTATTCTGTCATAATGCTCAACACCGATGCCCATAATCCTATGGTTAAGAACAAGATGTCTGCAGAAGACTTTATTAGAAACAATCGTGGCATAGATGATGGGAAAGATCTCCCTGAAGAGTATATGAGATCTTTGTATGAAAGAATTACCAAAAATGAGATTAAGATGAAGGAAGATGACTTGGCGGTTCAACAAAAGCAATCTATAAATTCCAACAAAATCCTAGGCTTGGACAGTATCTTGAATATTGTGATCCGTAAGCGAGGAGAGGAGATGGAGACCAGTGATGATCTCATCAGGCATATGCAAGAACAGTTTAAAGAAAAAGCTCGCAAGTCCGAGTCAGCTTATTATGCCGCAACAGATGTTGTGATCCTTAGGTTCATGATTGAGGTTTGCTGGGCTCCTATGCTGGCTGCTTTCAGTGTTCCACTTGATCAAAGTGATGATGAAGTGATTATATCCTTGTGTCTTGAAGGTTTTCGTAGTGCGATTCATGTTACTTCAGTGATGTCCATGAAGACTCACAGAGATGCTTTCGTCACGTCACTAGCAAAGTTCACCTCTCTCCACTCACCTGCTGATATCCAACAAAAAAACATATATGCTATCAAGGCAATAGTCACAATCGCAGATGAAGATGGGAATTACTTGCAAGAAGCATGGGAGCATATCTTGACATGTGTTTCCCGCTTCGAACATTTACACCTCCTTGGAGAAGGTGCTCCTCCTGATGCAACTTTCTTTGCTATACCTCAAAGTGATCAAGAAAAGTCAAGACAGGCAAAGTCTAACATCCTTCCACTTTTGAAGAAGAAGGGAGCTGGAAAAATTCAATATGCTGCAGCTGCAGTGAGAAGAGGTTCTTACGATAGTGCTGGTATTGGTGGCAATGCCTCCGTTACATCTGAACAGATGAATAATCTAGTCTCTAATCTGAACATGCTTGAACAAGTTGGAAGCGCTGAAATGAATCGGATATTTACTCGAAGTCAAAAGTTAAACAGTGAGGCAATCATTGATTTTGTTAAGGCACTATGTAAGGTCTCCATAGACGAATTACGATCTGCCTCCGATCCACGAGTCTTCAGCCTGACAAAGATTGTTGAGATTGCGCACTACAACATGAACCGCATTAGGCTTGTTTGGTCAAGCATCTGGCATGTGCTTGCTGACTTCTTTGTAGCCATCGGGTGTTCTGAAAATCTTTCTATTGCTATTTTTGCTATGGACTCATTGCGTCAATTGTCTATGAAGTTTTTGGAACGAGAAGAATTGGCTAATTATAATTTTCAAAATGAGTTTATGAAGCCCTTTGTGGTTGTTATGCGGAAGAGTAGTGCTGTTGAGATCCGGGAATTAATAATCAGATGTGTGTCTCAGATGGTGTTATCCAGAGTGAATAACGTCAAGTCTGGATGGAAGAGCATGTTCATGGTCTTCACCACTGCAGCTTATGATGATCACAAGAACATAGTTCTCTTAGCATTTGAGATAATGGAGAAGATTGTAAGAGACTACTTCCCATATATCACAGAGACAGAAACCACTACCTTTACAGACTGCGTAAATTGCCTCATTGCATTCACGAATAGCAGATTCAACAAGGACATTAGTCTCAGCGCCATTGGCTTTCTGCGCTACTGTGCAGAGAAGCTTGCTGAAGGAGATCTTGGTTCTTCAGGTAAAAGTAAGGATAAAGAGACTTCTGGGAATCTGTCTCCATCATCACCTCAAACAACAAAAGATGGAAAGCTGGAAAATGGAGAGCTAAATGATAAGGAAGATCATCTATATTTCTGGTTTCCTTTGTTGGCTGGACTGTCAGAACTTAGCTTTGACCCCAGACCTGAAATCAGAAAAAGTGCGCTACAGATTTTGTTTGATACATTACGGAACTATGGGCAACATTTTTCACTTCCTTTGTGGGAGAAAGTGTTTGAATCAGTTTTGTTTCGCATTTTTGATTATGTTCGCCATGCTGTTGATCCATCCATGGAGAACCCATCTGGAGAGAGCGGTGATAGTGAGCTAGCTGAATTTGATCAAGATTCATGGTTGTATGAGACATGTACTTCGTCTCTCGAGCTAATTGTAGACCTGTTTGTAAAATTCTACTCCACTGTCAATCCCCTGTTGAAGAAGGTTCTGATGCTATTAGTAAGCTTCATCAAGCGTCCTCACCAAAGCCTTGCTGGGATTGGTATTGCGGCATTAGTAAGATTGATTAGCAATGCTGGAGATCTCTTTGTGGATGACAAATGGCTTGAAGTGGTTTCTTCTTTGAAAGAAGCAGCTACTTCTACCCTTCCAGATTTTTCCTTTATTTTTGACGGGGATAGTTTAGTTAGAAGTAGCGAAGAATCTGTTAGTAGACAAGGTGTCAATGAGCCTACCGGGTCAGAGACAGCTGAACATGATTCAGAGAGCTTGAGAATGCATCAATTTTATGCTGCTGTATCTGATGTTAAGTGTCGTTGCGCTGTCCAACTCTTGTTAATCCAGGCTATTATGGAGGTCTACACAATGTACAGGACTCGGATATCTATGAGAAACGTGTGTGTTCTATTTGATGCTTTGCGTACAGTGGCATCACATGCACATAAGATAAACATTGATGCCAAGCTGTGTTCAAAGCTACAGGAGCTTGGGTCCATTACCCAAATGCAAGACCCTCCACTACTACGTCTTGAAAATGAGTCCTACCAGACGTGCCTCACACTGCTACAAAACCTTTTGCTGGATCGACCTCTAAACTTCAACGAGGAGGAAGTGGAATCCTACCTTGTTGAGCTTTGCCGAGAAGTGCTTCAATTCTATATAGACTCTTCTTCTGGGCAAGGAGTTGAATCAACCCGTGTCAATCAGCCCCACTGGAGCATTCCCTTGGGTTCCAGAAGACGTAGAGAGTTGACTGCGCGTGCACCTCTTATTGTGGCAACTCTGCAGGCTATACGTAGTTTGGCCGATACTTCATTTGAGAGAAACTTGTCACTCTTCTTCCCTTTGCTTTCAACCTTGATCAGTTGCGAACATGGGTCAAAGGATGTCCAAGTAGCATTGAGTGAAATGCTTAGCGTATCAGTTGGTCCAGTGCTGCTGCGATCCTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47347.p1 GENE.R_Transcript_47347~~R_Transcript_47347.p1 ORF type:complete len:1793 (+),score=334.58,Sec7|PF01369.16|1.4e-69,Sec7|PF01369.16|7.7e+03,Sec7|PF01369.16|4.5e+03,Sec7_N|PF12783.3|1.3e-44,Sec7_N|PF12783.3|7.7e+03,Sec7_N|PF12783.3|2.9e+03,Sec7_N|PF12783.3|8.3e+02,Sec7_N|PF12783.3|1.1e+02,DCB|PF16213.1|2.1e-41,DCB|PF16213.1|1.1e+03,DUF1981|PF09324.6|2.3e+02,DUF1981|PF09324.6|4.7e+03,DUF1981|PF09324.6|9e+02,DUF1981|PF09324.6|67,DUF1981|PF09324.6|8.6e-32,Mon2_C|PF16206.1|3.8e-11 R_Transcript_47347:421-5799(+)
MASSEADSRLKLVLAPSLEKIIKNGSWRKNSKLVHECKSLLEKLNSNPHSLSSPDSPTSESGAPGPVHDGGAHEYSMSDSDVILSPFINACCSGNVKIADAGLDCIQKLIAHGYLRGEADLAGSNPESKLLNRVIDSVCKCIEINDENIELNVLKTLLSAVTSTSLRIHGDCLLQIVRTCYDIYLGSKNVVNQTTAKASLIQMLVIVFRRMEADSSTVPVQPIVVAELMEPPEKSDADPGMTQFVQGFITRIMQDIDGVLNPVALPEKGGGGAAVHDGAFETRINATVEGTNPADLLDSTDKDMLDAKYWEISMYKSALEGRKGELADGEEGAAAAVAGMVERDDDLEVQIGNKLRRDAFLVFRALCKLSMKTPPKEALQDPQLMRGKIVALELLKILLENAGAIFRTSDRFLGAIKQYLCLSLLKNSASTLMIVFQLSCSIFMSLVARFRAGLKAEIGVFFPMIVLRVLENVAQPNFQQKMIVLRFLEKLCEDSQILVDIFINYDCDVNSSNIFERMVNGLLKTAQGVPPGVTTTLLPPQEVTLKFEAMKSLVAVLKSMGDWMNRQLRIPDPHSAKRYEPAENSPEVGSPHLANGNGDEASEGSDVPSESSNDISDVQTIEQRRAYKLELQEGISLFNRKPKKGIEFLINANKVGSSPEEIATFLKDASGLNKTLIGDYLGEREEMSLKVMHSYVDSFDFQGKQLDEAIRVFLQGFRLPGEAQKIDRIMEKFAERYWKCNPKAFSSADTAYVLAYSVIMLNTDAHNPMVKNKMSAEDFIRNNRGIDDGKDLPEEYMRSLYERITKNEIKMKEDDLAVQQKQSINSNKILGLDSILNIVIRKRGEEMETSDDLIRHMQEQFKEKARKSESAYYAATDVVILRFMIEVCWAPMLAAFSVPLDQSDDEVIISLCLEGFRSAIHVTSVMSMKTHRDAFVTSLAKFTSLHSPADIQQKNIYAIKAIVTIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAIPQSDQEKSRQAKSNILPLLKKKGAGKIQYAAAAVRRGSYDSAGIGGNASVTSEQMNNLVSNLNMLEQVGSAEMNRIFTRSQKLNSEAIIDFVKALCKVSIDELRSASDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLADFFVAIGCSENLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVVVMRKSSAVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEIMEKIVRDYFPYITETETTTFTDCVNCLIAFTNSRFNKDISLSAIGFLRYCAEKLAEGDLGSSGKSKDKETSGNLSPSSPQTTKDGKLENGELNDKEDHLYFWFPLLAGLSELSFDPRPEIRKSALQILFDTLRNYGQHFSLPLWEKVFESVLFRIFDYVRHAVDPSMENPSGESGDSELAEFDQDSWLYETCTSSLELIVDLFVKFYSTVNPLLKKVLMLLVSFIKRPHQSLAGIGIAALVRLISNAGDLFVDDKWLEVVSSLKEAATSTLPDFSFIFDGDSLVRSSEESVSRQGVNEPTGSETAEHDSESLRMHQFYAAVSDVKCRCAVQLLLIQAIMEVYTMYRTRISMRNVCVLFDALRTVASHAHKINIDAKLCSKLQELGSITQMQDPPLLRLENESYQTCLTLLQNLLLDRPLNFNEEEVESYLVELCREVLQFYIDSSSGQGVESTRVNQPHWSIPLGSRRRRELTARAPLIVATLQAIRSLADTSFERNLSLFFPLLSTLISCEHGSKDVQVALSEMLSVSVGPVLLRSC*

Click here to download the sequence:
Link to NCBI Protein BLAST