Transcript Information: R_Transcript_47353.p1


Annotated TAIR IDAT1G06110.1
Annotated Gene NameSKP1/ASK-interacting protein 16
Annotated Gene Symbol(s)SKIP16
Annotation TypeOrtholog
Chromosome Positionchr1:1853237-1854938 | Reverse length=436
E-Value2E-184
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.535375422855
Replicate 219.091984797145
Replicate 321.042235698791
Condition 2: 8 Hour
Replicate 117.823431926716
Replicate 222.672894145946
Replicate 323.512667710594
Condition 3: 24 Hour
Replicate 125.413758698575
Replicate 223.799163081925
Replicate 327.843196427286


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47353.p1 GENE.R_Transcript_47353~~R_Transcript_47353.p1 ORF type:complete len:430 (+),score=66.35,DUF525|PF04379.10|1.1e-22 R_Transcript_47353:195-1484(+)
ATGCAGAGTATAGATGAAGTGTTGGGGGACTTAGCGATTCACATAATACTGTCAAAATTAGACCCAAATGACACAGCTAAGGTCGCTTGTGTTAACAAGAGATTCAAGACATGGGCTTCTGAAGATTCCTTATGGTCATTTCACTGCTCTAATGACCTCTCTATTTCCTCCCCTATTGACCCTTTTGGAAACCCTCTTCCCTCATTCAAGGCGGCTTATCAGCTATGGAGGGAAGCCTTTGGCATGTATCCTTGGCCGCTAGTGAAACGAGTCAAAAGTTGTTGGGATAGACTTAAAAGCTGGCTGGGAAGCAATTTTCCTGAGGTTGTGGCCAGTTTGAGAAAGGGCTCAACTGAAGAGGAGTTAAATGAGGTGGAGAAAAGCTTGAAAGTTAAGCTGCCTCCTCCTACAAGGTTAATTTATCGCTTCCATGATGGTCAGGAGCATTCTGATAAATTATCGGGTCTTATTGGAGGGTACTCAGTGTATGACCACTTAGTAAATGTTAATTTATTACCCCTGAGGCAGGTTGTTATGGCGACAAGGCACATTACTTGTGACTTAGGTTTCTCTAGTGCATCCAAGCATATAGCTGTAGCTGCCTCTCTTACAGGAAGTGAAAAGGTTTTTTTCCTTAACTGTGTCAACTTGGAGCTAAATGTTGGTACTGTCAATCTCCGAGAGGGAGAGATTATGCCTTGTGTTCCAAATGCATTGTTGAAGTCTAGTGGTGATCAGCAATGTGATGGACTGTTGTTGTGGTTGGAAGAACATGGCCATCGTATGGAAAGTGGATTGATCTCAGTTCGCGAGGAAGATAATCTGAAATTTATTTGTCAGTTTCCAGAAAAACCGCCTCTTTGCTCCACAGCTGTCACAAATGGTGTGCAGGTACGTGCATCTGGTGTGCTTGTTCCAGAGCAGAGTGACCTTCACGATCCAGGGTTCGTGTTTACTTACTCAATCCGGCTGTCCCTCTTACCCGAGGGATGCTCTGTTCATGGCATGAAATTTAGCTCTTGCCAGCTGTATTGGAGGCGATGGATTATTCGGGAAGATGAAAAAATTAAACATGATGTTAATGGGGAAGCTGTTGTAGGAAAGTACCCCTTACTATCGCCTGGTGAGAAAGAATTTGCTTATCAGAGCTGTACAAATCAGAAACGAACCCCTGGTTCTATCGAGGGCTCCTTCACATTTGTCCCTGGAAGACTGACGGAGCCAAAAGGTGATCCTTTCGAGGTTGAAGTAGCACGCTTTCCTCTCGTGATGCCAGATTACATTTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47353.p1 GENE.R_Transcript_47353~~R_Transcript_47353.p1 ORF type:complete len:430 (+),score=66.35,DUF525|PF04379.10|1.1e-22 R_Transcript_47353:195-1484(+)
MQSIDEVLGDLAIHIILSKLDPNDTAKVACVNKRFKTWASEDSLWSFHCSNDLSISSPIDPFGNPLPSFKAAYQLWREAFGMYPWPLVKRVKSCWDRLKSWLGSNFPEVVASLRKGSTEEELNEVEKSLKVKLPPPTRLIYRFHDGQEHSDKLSGLIGGYSVYDHLVNVNLLPLRQVVMATRHITCDLGFSSASKHIAVAASLTGSEKVFFLNCVNLELNVGTVNLREGEIMPCVPNALLKSSGDQQCDGLLLWLEEHGHRMESGLISVREEDNLKFICQFPEKPPLCSTAVTNGVQVRASGVLVPEQSDLHDPGFVFTYSIRLSLLPEGCSVHGMKFSSCQLYWRRWIIREDEKIKHDVNGEAVVGKYPLLSPGEKEFAYQSCTNQKRTPGSIEGSFTFVPGRLTEPKGDPFEVEVARFPLVMPDYIF*

Click here to download the sequence:
Link to NCBI Protein BLAST