Transcript Information: R_Transcript_47358.p1


Annotated TAIR IDAT1G06110.1
Annotated Gene NameSKP1/ASK-interacting protein 16
Annotated Gene Symbol(s)SKIP16
Annotation TypeHomolog
Chromosome Positionchr1:1853237-1854938 | Reverse length=436
E-Value1E-138
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.284368486106
Replicate 27.423854594049
Replicate 39.9378471132982
Condition 2: 8 Hour
Replicate 16.6924489877503
Replicate 29.6525281700563
Replicate 310.197976465684
Condition 3: 24 Hour
Replicate 110.707003370838
Replicate 29.5684420349576
Replicate 313.911274345468


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47358.p1 GENE.R_Transcript_47358~~R_Transcript_47358.p1 ORF type:complete len:461 (+),score=65.10,DUF525|PF04379.10|4.7e-22 R_Transcript_47358:166-1548(+)
ATGCAGAGTATAGATGAAGTGTTGGGGGACTTAGCGATTCACATAATACTGTCAAAATTAGACCCAAATGACACAGCTAAGGTCGCTTGTGTTAACAAGAGATTCAAGACATGGGCTTCTGAAGATTCCTTATGGTCATTTCACTGCTCTAATGACCTCTCTATTTCCTCCCCTATTGACCCTTTTGGAAACCCTCTTCCCTCATTCAAGGCGGCTTATCAGCTATGGAGGGAAGCCTTTGGCATGTATCCTTGGCCGCTAGTGAAACGAGTCAAAAGTTGTTGGGATAGACTTAAAAGCTGGCTGGGAAGCAATTTTCCTGAGGTTGTGGCCAGTTTGAGAAAGGGCTCAACTGAAGAGGAGTTAAATGAGGTGGAGAAAAGCTTGAAAGTTAAGCTGCCTCCTCCTACAAGGTTAATTTATCGCTTCCATGATGGTCAGGAGCATTCTGATAAATTATCGGGTCTTATTGGAGGGTACTCAGTGTATGACCACTTAGTAAATGTTAATTTATTACCCCTGAGGCAGGTTGTTATGGCGACAAGGCACATTACTTGTGACTTAGGTTTCTCTAGTGCATCCAAGCATATAGCTGTAGCTGCCTCTCTTACAGGAAGTGAAAAGATTTTTTTCCTAAACTGTGTCAACTTGGAGCTATATGTTGGTACTGTCAATCTCCAAGAGGGAGAGATTATGCCTTGTGTTCCAAATGCATTGTTGAAGTCTAGTGGTGATCAGCAATGTGATGGACTGTTGTTGTGGTTGGAAGAACATGGCCATCGTATGGAAAGTGGATTGATCTCAGTTCGCGAGGAAGATAATCTGAAATTTATTTGTCAGTTTCCAGAAAAACCGCCTCTTTGCTCCACAGCTGTCACAAATGGTGTGCAGGTACGTGCATCTGGTGTGCTTGTTCCAGAGCAGAGTGACCTTCACGATCCAGGGTTCGTGTTTACTTACTCAATCCGGCTGTCCCTCTTACCCGAGGGATGCTCTGTTCATGGCATGAAATTTAGCTCTTGCCAGCTGTATTGGAGGCGATGGATTATTCGGGAAGATGAAAAAATTAAACATGATGTTAATGGGGAAGCTATCGTAGGAAAGTACCCCTTACTGTCGCCTGGTGAGAAAGAATTTGCTTATCAGAGCTGTACAAATCAGAAACGAACCCCTGGTTCTATCGAGGGCTCCTTCACATTTGTCCCTGGAAGATTTTTTTTCTTTAATGTGTGGGATACACCAGGCCCATGCAGTAGTGCAACGCATGGGTGGCACTCGAAGGCCCCAGTAGCTTGTTTCCTGCACTTTGGGGGTAAGCAGGATTTCATGGGAAGTTCCATTACTTGTGTCCTTGCCCACCAAAAAGCCTTACAGTTAAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47358.p1 GENE.R_Transcript_47358~~R_Transcript_47358.p1 ORF type:complete len:461 (+),score=65.10,DUF525|PF04379.10|4.7e-22 R_Transcript_47358:166-1548(+)
MQSIDEVLGDLAIHIILSKLDPNDTAKVACVNKRFKTWASEDSLWSFHCSNDLSISSPIDPFGNPLPSFKAAYQLWREAFGMYPWPLVKRVKSCWDRLKSWLGSNFPEVVASLRKGSTEEELNEVEKSLKVKLPPPTRLIYRFHDGQEHSDKLSGLIGGYSVYDHLVNVNLLPLRQVVMATRHITCDLGFSSASKHIAVAASLTGSEKIFFLNCVNLELYVGTVNLQEGEIMPCVPNALLKSSGDQQCDGLLLWLEEHGHRMESGLISVREEDNLKFICQFPEKPPLCSTAVTNGVQVRASGVLVPEQSDLHDPGFVFTYSIRLSLLPEGCSVHGMKFSSCQLYWRRWIIREDEKIKHDVNGEAIVGKYPLLSPGEKEFAYQSCTNQKRTPGSIEGSFTFVPGRFFFFNVWDTPGPCSSATHGWHSKAPVACFLHFGGKQDFMGSSITCVLAHQKALQLN*

Click here to download the sequence:
Link to NCBI Protein BLAST