Transcript Information: R_Transcript_473971.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value3E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.21558615300849
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.088034967878683
Replicate 30.35731516969266
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.68937652557157


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_473971.p1 GENE.R_Transcript_473971~~R_Transcript_473971.p1 ORF type:5prime_partial len:254 (+),score=42.18,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|1.3e+04,zf-RVT|PF13966.2|6.7e-08 R_Transcript_473971:1-762(+)
CTTAGTGCCTCTGGTATTAATGCCTCAATGTGTAAGAAATTGATTGAAAAAATAAAGCTTAAGACCAACCACTGGACCACTCACACACTCTCCTATGCTAGTAGGATGGAGCTTATCAATTCAGTAATTTTTGGCATAGAGACCTTCTGGTGTAGTGCATTTCTATTACCAAAAGGGGTTATTGAGGAGATTGAGAAAATTTGCAGAAAATTTCTTTGGGGCATACCTGAAAAGGGAAGAAGATTGGTTTATTTGGCTTGGAGTAGGGTGTGTGAGAGTAGGAAACATGGTGGATTCAATATCAAGGAGGTCCTGAGCTGGAACAAAAGTATGCTTCTTAGGTGGTTAGCTAAGCTTCATGGGGAGGATGGTTCCCTTTGGAAGACCTGGTGTCAGAAATACTATCTGAAAGGCAAATCTGTATGGGACATTGAGAAGAGGAATGGGGATTCATGGGCTTGGAGGGGAATTCTGAAAGTAAGAGATGAAATTATACAAAAGACTGGTACTGTGCAGGAGGCTAGTGATCTGTTAAAGGTTTTGTCAGAGGGCAAGCAATCTTTTGTCAAAAATGCTTACAACTTCGTGATAGGAGAAAAAAGGAAGGTAAATTGGGATAAGACTATATGGGATCCTGCTAATGCTCCAAAACACTCAGTGATTGCTGCTCTAGCAATCCAAGAAGCCCTGCCCACAGTTGACAATATGAACAAAAGAGGCTTTCTACTAGTTAACAGGTGTATTTTGTGCAAAAACCAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_473971.p1 GENE.R_Transcript_473971~~R_Transcript_473971.p1 ORF type:5prime_partial len:254 (+),score=42.18,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|1.3e+04,zf-RVT|PF13966.2|6.7e-08 R_Transcript_473971:1-762(+)
LSASGINASMCKKLIEKIKLKTNHWTTHTLSYASRMELINSVIFGIETFWCSAFLLPKGVIEEIEKICRKFLWGIPEKGRRLVYLAWSRVCESRKHGGFNIKEVLSWNKSMLLRWLAKLHGEDGSLWKTWCQKYYLKGKSVWDIEKRNGDSWAWRGILKVRDEIIQKTGTVQEASDLLKVLSEGKQSFVKNAYNFVIGEKRKVNWDKTIWDPANAPKHSVIAALAIQEALPTVDNMNKRGFLLVNRCILCKNQ*

Click here to download the sequence:
Link to NCBI Protein BLAST