Transcript Information: R_Transcript_474.p1


Annotated TAIR IDAT3G25890.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:9476052-9477050 | Forward length=332
E-Value4.5E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.68051599722
Replicate 27.769273242728
Replicate 39.0366029049042
Condition 2: 8 Hour
Replicate 114.152380657582
Replicate 210.052139543285
Replicate 312.767187898131
Condition 3: 24 Hour
Replicate 115.796656349338
Replicate 212.882429504894
Replicate 316.13130528912


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_474.p1 GENE.R_Transcript_474~~R_Transcript_474.p1 ORF type:complete len:327 (+),score=107.10,AP2|PF00847.16|1.7e-11 R_Transcript_474:695-1675(+)
ATGTTGGCCCAAAACATCTTCTTTTACAACAAGAAGCCAAGTTTTGTAGGTGGTGCCAAAACTCTTAGAAAAATTAGAGTGATTTGCTATGATCCTTATTTGACTGATTCATCCTCCGACGAAGAGGAAAGTGAGGGTCTTAATAGGAGAAGAATCCCAACTGGGTCTAACTCAAAGAAGAGATTTGTTCAGGAGGTTAACTTGCCCTTATCTCCAAATGGAAGTTCTAGCAACATCAATAACCCTATTGTTGAAACTGAGAGTTCTTGCCAAGACAGTAACAATGGGAACAAAAACCCTGAGAAAAAGAGGAGGGTTTTAGAAAAGTCTTCCAAAAGAAAGCCTCCTGCTTCCAAGTATAGAGGTGTTAGGCAAAGGAAATGGGGGAAATGGGCTGCTGAGATTCGAGACCCGAATCGTGGCGTTCGGGTTTGGTTGGGTACTTACAACACTGCTGAAGAAGCTTCTAAGGCTTATGAAAACAAGAAGCTTGAATTCCAAGCATTGGCTGCTGAAAAGAGCCAAAATGCTTCATGTTCTGCAGCCCAAAACCCTGCTGTTTCCGAGGATTCAGAGAGTGTTTTGTCACAAAACTCACCTTCTTCTGTGCTTGAAGTCGATACTTCTGTTTCACAGATTAATGAAAACAACGAGGATGTTGCTGTTGATGTTAATGATGATGAAGGAAAGAAGCAACATGTTGAATCTTGTGATGATGATGTTATTAAGGATAACAACTCTGAGGCAATGCCTGTTTTGAGGTCCATTGAAGAAGATTTCCAACGTATTGAAGTTGCTCAAGGTCTTGATTTGCAAATGGAGTTCGATTCGTCACTCATATTCAATGATTTTGGTGACTTCCAATTTTGTGGGTTTGATACTCAAGATCATAGTGCTCTTCCTGATTTCGATTTCGAGCTCGGAAATGAAGATCTTGCCTGGATTGAAGAACCCCTCAATATTGCAGCTTGCTGCCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_474.p1 GENE.R_Transcript_474~~R_Transcript_474.p1 ORF type:complete len:327 (+),score=107.10,AP2|PF00847.16|1.7e-11 R_Transcript_474:695-1675(+)
MLAQNIFFYNKKPSFVGGAKTLRKIRVICYDPYLTDSSSDEEESEGLNRRRIPTGSNSKKRFVQEVNLPLSPNGSSSNINNPIVETESSCQDSNNGNKNPEKKRRVLEKSSKRKPPASKYRGVRQRKWGKWAAEIRDPNRGVRVWLGTYNTAEEASKAYENKKLEFQALAAEKSQNASCSAAQNPAVSEDSESVLSQNSPSSVLEVDTSVSQINENNEDVAVDVNDDEGKKQHVESCDDDVIKDNNSEAMPVLRSIEEDFQRIEVAQGLDLQMEFDSSLIFNDFGDFQFCGFDTQDHSALPDFDFELGNEDLAWIEEPLNIAACCP*

Click here to download the sequence:
Link to NCBI Protein BLAST