Transcript Information: R_Transcript_47416.p1


Annotated TAIR IDAT2G30933.1
Annotated Gene NameCarbohydrate-binding X8 domain superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:13164179-13166517 | Reverse length=227
E-Value1.6E-50
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.71198525514
Replicate 216.236005585073
Replicate 320.773721544689
Condition 2: 8 Hour
Replicate 114.076894018254
Replicate 215.209020847446
Replicate 315.579520046648
Condition 3: 24 Hour
Replicate 124.816738987032
Replicate 215.536903024131
Replicate 327.736241161939


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47416.p1 GENE.R_Transcript_47416~~R_Transcript_47416.p1 ORF type:complete len:247 (+),score=21.86,X8|PF07983.9|7.2e-20 R_Transcript_47416:589-1329(+)
ATGGGTAAAAGGGTTTCTATAACTTTACTCGTTCTTGGTCTGCTCCTCTGTTCAGTTCCTTATATTGTGTTGTGTGGAGCAATTGAACCTGAAGAGTTGCCTAGTGAAGCTAAACTCGGAACCTTGACAACAACTTCAACTGTCCAAAAGGACATCACAACCCCTCTCACAACGGTGCCAACTATTAACTTCATGCCTGGATCAACGGCACCCATACTGAACCCAAACTCAATCCCGGAAACACCGAATACTTGGGTCCCACTCGCTACTCCATCCACCTCATCTCCCGTAACCTCAGGCGCTAGTTGGTGTATTGCTAGCCAAACTTCCCCTCGATCAGCATTGCAGGGTGCTTTGGATTATGCTTGTGGCCATGGTGGTGCTGACTGCTTGGCCATTCAGCCTGGTGGCAGTTGCTACTATCCAAATACTCTCCATGACCACGCATCTTTTGCGTTCAACAGCTACTACCAGAAGAACCCAATCCCCAACAGTTGTAATTTCAGAGGAACTGCTGTCATTACCAGCACCAACCCAAGCTCTGGAGCATGCCAATATCCCTCAACAAGTACAAGCTCATCTGTGCTAGACACAACACACCAGAACGTTTCAACGGTTTTTGGGGTGGGCCCACCTGGACCGGACATTTCGGCTGGCACCCTCATATTCAACAAAGTTCTTTATCTTTCCATATCAATGTGGTTCATAGTTCTGCTACTCAGATATGGATATGAACGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47416.p1 GENE.R_Transcript_47416~~R_Transcript_47416.p1 ORF type:complete len:247 (+),score=21.86,X8|PF07983.9|7.2e-20 R_Transcript_47416:589-1329(+)
MGKRVSITLLVLGLLLCSVPYIVLCGAIEPEELPSEAKLGTLTTTSTVQKDITTPLTTVPTINFMPGSTAPILNPNSIPETPNTWVPLATPSTSSPVTSGASWCIASQTSPRSALQGALDYACGHGGADCLAIQPGGSCYYPNTLHDHASFAFNSYYQKNPIPNSCNFRGTAVITSTNPSSGACQYPSTSTSSSVLDTTHQNVSTVFGVGPPGPDISAGTLIFNKVLYLSISMWFIVLLLRYGYER*

Click here to download the sequence:
Link to NCBI Protein BLAST