Transcript Information: R_Transcript_47425.p1


Annotated TAIR IDAT1G72050.2
Annotated Gene Nametranscription factor IIIA
Annotated Gene Symbol(s)TFIIIA
Annotation TypeHomolog
Chromosome Positionchr1:27115082-27117228 | Forward length=412
E-Value5E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.76854572440921
Replicate 20.66304106577783
Replicate 31.0448687324561
Condition 2: 8 Hour
Replicate 11.5464756808786
Replicate 21.0984292834267
Replicate 31.5285566838221
Condition 3: 24 Hour
Replicate 11.6916279009887
Replicate 21.0834162262038
Replicate 30.9215875657641


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47425.p1 GENE.R_Transcript_47425~~R_Transcript_47425.p1 ORF type:3prime_partial len:285 (+),score=32.90,zf-C2H2_4|PF13894.2|0.55,zf-C2H2_4|PF13894.2|0.0043,zf-C2H2_4|PF13894.2|0.21,zf-C2H2_4|PF13894.2|0.017,zf-C2H2_4|PF13894.2|0.0046,zf-C2H2_4|PF13894.2|3.9,zf-C2H2_4|PF13894.2|95,zf-C2H2_4|PF13894.2|4.5e+02,zf-C2H2|PF00096.22|0.0044,zf-C2H2|PF00096.22|3.6e-05,zf-C2H2|PF00096.22|0.032,zf-C2H2|PF00096.22|0.4,zf-C2H2|PF00096.22|0.003,zf-C2H2|PF00096.22|30,zf-C2H2|PF00096.22|1.6e+04,zf-C2H2|PF00096.22|3.5e+02,zf-H2C2_2|PF13465.2|89,zf-H2C2_2|PF13465.2|1.9,zf-H2C2_2|PF13465.2|7.2e-05,zf-H2C2_2|PF13465.2|0.067,zf-H2C2_2|PF13465.2|5,zf-H2C2_2|PF13465.2|1.3e+03,zf-H2C2_2|PF13465.2|6.5 R_Transcript_47425:59-853(+)
ATGGCGGAATCACAAGGCGAGGTCAAAAGAGAGCCAATATTCAGAGACATAAGACGTTACTACTGCGAATTTTGCGGGGAATCTCGATCCAAAAAAGCCCTACTCACCACTCACATGCAAAAGGAACATCCGGATGAGTTTGAGAAGCAAAAAGACCAGAACTTGGAAGAAGAAAATGAAGGGAAAAAGTTGAATGATAGAACTTGTGAAGAATGTGGTGCAACTTTTAAGAAGCCTGCCCATTTAGAACAACATATGAAGATACACTCTAATGAGAAGCCCTTTGTTTGTATGGTTGATGACTGCTGTAGCAGTTTCAAGAGGAAATACCACTTAGAGCGCCATATGAACCAGCATGAAGGAAAGCTGTTCAAATGCCCAATTGAAGGTTGTAATAAGGAGTTGAGTGTATACGGGAATATGGCGAGACATGTAAAAGAAATGCATCAAGGAAAGCCTACTCCCAGCAATGTAACGGAAAAAATGAAGCATCTCTGTCCGGAAGTTGGTTGTGGAAAGGAGTTCAAATTCCCTAGTCAGTTGCGTGATCATCTATTGTTTCATGTTAAATTGGATTCAGAAGCAATCTGCGCTGATCCTGCCTGTATGCAACGTTTCCCCAATATTGAGTCCCTCCGAGAACATACTAGGTCGTGCCACCAATATATAAAGTGCGATGTTTGTGGTTGCATGCATCTAAGGAAGAACATCAAAAGGCACCTCCGAAGTCATGAAGAGCACCCACACGAGGTCTTCCAGTGCCAAGTTGAGGGTTGCAATGCCTCGTATACCACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47425.p1 GENE.R_Transcript_47425~~R_Transcript_47425.p1 ORF type:3prime_partial len:285 (+),score=32.90,zf-C2H2_4|PF13894.2|0.55,zf-C2H2_4|PF13894.2|0.0043,zf-C2H2_4|PF13894.2|0.21,zf-C2H2_4|PF13894.2|0.017,zf-C2H2_4|PF13894.2|0.0046,zf-C2H2_4|PF13894.2|3.9,zf-C2H2_4|PF13894.2|95,zf-C2H2_4|PF13894.2|4.5e+02,zf-C2H2|PF00096.22|0.0044,zf-C2H2|PF00096.22|3.6e-05,zf-C2H2|PF00096.22|0.032,zf-C2H2|PF00096.22|0.4,zf-C2H2|PF00096.22|0.003,zf-C2H2|PF00096.22|30,zf-C2H2|PF00096.22|1.6e+04,zf-C2H2|PF00096.22|3.5e+02,zf-H2C2_2|PF13465.2|89,zf-H2C2_2|PF13465.2|1.9,zf-H2C2_2|PF13465.2|7.2e-05,zf-H2C2_2|PF13465.2|0.067,zf-H2C2_2|PF13465.2|5,zf-H2C2_2|PF13465.2|1.3e+03,zf-H2C2_2|PF13465.2|6.5 R_Transcript_47425:59-853(+)
MAESQGEVKREPIFRDIRRYYCEFCGESRSKKALLTTHMQKEHPDEFEKQKDQNLEEENEGKKLNDRTCEECGATFKKPAHLEQHMKIHSNEKPFVCMVDDCCSSFKRKYHLERHMNQHEGKLFKCPIEGCNKELSVYGNMARHVKEMHQGKPTPSNVTEKMKHLCPEVGCGKEFKFPSQLRDHLLFHVKLDSEAICADPACMQRFPNIESLREHTRSCHQYIKCDVCGCMHLRKNIKRHLRSHEEHPHEVFQCQVEGCNASYTT

Click here to download the sequence:
Link to NCBI Protein BLAST