Transcript Information: R_Transcript_474267.p1


Annotated TAIR IDAT5G42190.1
Annotated Gene NameE3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein
Annotated Gene Symbol(s)ASK2, SKP1B
Annotation TypeHomolog
Chromosome Positionchr5:16854495-16855516 | Reverse length=171
E-Value6E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.15210800795599
Replicate 20.52490751040745
Replicate 30.76355791987175
Condition 2: 8 Hour
Replicate 10
Replicate 20.18634068200988
Replicate 30.15126342183656
Condition 3: 24 Hour
Replicate 10.38263012046174
Replicate 20.18379382408814
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_474267.p1 GENE.R_Transcript_474267~~R_Transcript_474267.p1 ORF type:complete len:120 (+),score=26.86,Skp1|PF01466.15|2.7e+03,Skp1|PF01466.15|6.3e-27,Skp1_POZ|PF03931.11|2.3e-09,Skp1_POZ|PF03931.11|4.9e+03,Skp1_POZ|PF03931.11|1.7e+03 R_Transcript_474267:155-514(+)
ATGATCGAAGACGATTGCGCTAACATCATCATTCCACTCCCTAACATCACCTCTCAAACCCTAGTCAAGGTCATTGAGTACATGAAGAAACATGCACAAGGGTTGGGTTCGAGCTCGGGTCCGGGTTCGGGTTCGGATGAAGTTGTCGATGATGAAGATGTGATGAAGAAGTGGGACAAACATTTTGTAGAAGTGGAGCAGAATATGCTATTTGATTTGATATTGGCTGCTGATTATTTGGATATTAAGGGACTTGTTGACTTGACTTGTCAAACTGTGGCTGATATGATTAAGGGTAAGACTCCTGAGGAGATTAGGAAGACTTTTATAAATGTGGACCAGAATATGCTCATACTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_474267.p1 GENE.R_Transcript_474267~~R_Transcript_474267.p1 ORF type:complete len:120 (+),score=26.86,Skp1|PF01466.15|2.7e+03,Skp1|PF01466.15|6.3e-27,Skp1_POZ|PF03931.11|2.3e-09,Skp1_POZ|PF03931.11|4.9e+03,Skp1_POZ|PF03931.11|1.7e+03 R_Transcript_474267:155-514(+)
MIEDDCANIIIPLPNITSQTLVKVIEYMKKHAQGLGSSSGPGSGSDEVVDDEDVMKKWDKHFVEVEQNMLFDLILAADYLDIKGLVDLTCQTVADMIKGKTPEEIRKTFINVDQNMLIL*

Click here to download the sequence:
Link to NCBI Protein BLAST