Transcript Information: R_Transcript_474352.p1


Annotated TAIR IDAT3G63520.1
Annotated Gene Namecarotenoid cleavage dioxygenase 1
Annotated Gene Symbol(s)CCD1, ATCCD1, ATNCED1, NCED1
Annotation TypeHomolog
Chromosome Positionchr3:23452940-23455896 | Forward length=538
E-Value6E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.18949899865411
Replicate 30.30765441729469
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_474352.p1 GENE.R_Transcript_474352~~R_Transcript_474352.p1 ORF type:internal len:118 (+),score=22.86,RPE65|PF03055.11|5.2e-21 R_Transcript_474352:3-353(+)
AAAATACCAGAAGATTTAGATGGAGTATTTGTGAGAAATGGACCTAATCCAAAATATCCAATCAAGGGAAACTACCATTGGTTTGATGGGGATGGGTATCTTCACGAGATGGAATTGAAGGATGGAAAGATCGTCAAGTATCATGGAAAGTATACCAGAACCCAAAGAATGCAAAACGAAGATAAGGCAGGAGAAAGATTATACCCTCTTTTGGGAGACATCATCGATCCTAAACAATTCATCAAAGTGTTTTTCAAAGTGCTCATCCAAAGAATCAAGAACAAGGGAAAGAAAACACCACCTATGGGCACAGCCAACACCTCCATCGAGTTCCATGCAAAGAGATTCTTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_474352.p1 GENE.R_Transcript_474352~~R_Transcript_474352.p1 ORF type:internal len:118 (+),score=22.86,RPE65|PF03055.11|5.2e-21 R_Transcript_474352:3-353(+)
KIPEDLDGVFVRNGPNPKYPIKGNYHWFDGDGYLHEMELKDGKIVKYHGKYTRTQRMQNEDKAGERLYPLLGDIIDPKQFIKVFFKVLIQRIKNKGKKTPPMGTANTSIEFHAKRFF

Click here to download the sequence:
Link to NCBI Protein BLAST