Transcript Information: R_Transcript_474735.p1


Annotated TAIR IDAT1G79010.1
Annotated Gene NameAlpha-helical ferredoxin
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:29725138-29726933 | Reverse length=222
E-Value1.7E-94
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.074501881447832
Replicate 20.085699185372645
Replicate 30.28049066444268
Condition 2: 8 Hour
Replicate 10.099942305907123
Replicate 20.18253781094845
Replicate 30.14817641322765
Condition 3: 24 Hour
Replicate 10.093705335623282
Replicate 20
Replicate 30.089337570150601


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_474735.p1 GENE.R_Transcript_474735~~R_Transcript_474735.p1 ORF type:5prime_partial len:245 (+),score=36.17,Fer4|PF00037.23|2.4e-05,Fer4|PF00037.23|1.9e-08,Fer4_7|PF12838.3|3.9e-12,Fer4_21|PF14697.2|8.4e-05,Fer4_21|PF14697.2|0.0017,Fer4_16|PF13484.2|9.1e+03,Fer4_16|PF13484.2|0.00056,Fer4_16|PF13484.2|4.3e-05,Fer4_10|PF13237.2|9.9e-08,Fer4_10|PF13237.2|0.0027,Fer4_9|PF13187.2|1.8e-08,Fer4_2|PF12797.3|0.007,Fer4_2|PF12797.3|0.0008,Fer4_6|PF12837.3|0.00041,Fer4_6|PF12837.3|0.012,Fer4_8|PF13183.2|0.00023,Fer4_8|PF13183.2|0.0011,Fer4_4|PF12800.3|0.00087,Fer4_4|PF12800.3|0.17 R_Transcript_474735:3-737(+)
ATAATGTTGCCCAGAACTCGTATCCTAAGAACCAATGCAACTGCTTCATCTTCTAAAATTCAATCTATTAAACTTCAATCAAGAAAATACCCAACAATTCTCCCCTCTAAATCCAATGTAACATTTTTGACGGAAGAACAAGTAAATATTTTGAAAGAAAGAGATCAAGAACGTATCAAGAGTACATTAGAAGAAATGGATAATTACAAAAAAATGAACAAAGAAGCACCTGCCTATGGTACACCTGCACATATGTTGGATTATGGTGTAAAAACTTTCTTCCTTACAGAAATAATTCACGGTCTTTTGATTTGCGCACACGCAATGTTTCAACCAAAGTTCACTATCAACTATCCATTTGAAAAAGGTCCCATCAGTCCAAGATTTCGAGGTGAACATGCTTTACGTAGATATCCAACTGGTGAAGAAAGATGTATTGCTTGTAAATTATGTGAAGCAATTTGCCCTGCTCAAGCTATTACCATTGAAGCTGAACCACGAGCTGATGGTAGCAGAAGGACAACTCGATATGATATTGATATGACCAAGTGCATTTACTGTGGATTTTGCCAAGAGGCTTGCCCCGTTGATGCTATTGTTGAGGGTCCTAACTTTGAGTTTTCCACTGAAACTCACGAAGAGTTATTGTACAACAAAGAGAAATTGTTATCAAATGGCGACAGGTGGGAACCTGAAATTGCTGCCAACTTAAAGGCAGAAATTCCATACAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_474735.p1 GENE.R_Transcript_474735~~R_Transcript_474735.p1 ORF type:5prime_partial len:245 (+),score=36.17,Fer4|PF00037.23|2.4e-05,Fer4|PF00037.23|1.9e-08,Fer4_7|PF12838.3|3.9e-12,Fer4_21|PF14697.2|8.4e-05,Fer4_21|PF14697.2|0.0017,Fer4_16|PF13484.2|9.1e+03,Fer4_16|PF13484.2|0.00056,Fer4_16|PF13484.2|4.3e-05,Fer4_10|PF13237.2|9.9e-08,Fer4_10|PF13237.2|0.0027,Fer4_9|PF13187.2|1.8e-08,Fer4_2|PF12797.3|0.007,Fer4_2|PF12797.3|0.0008,Fer4_6|PF12837.3|0.00041,Fer4_6|PF12837.3|0.012,Fer4_8|PF13183.2|0.00023,Fer4_8|PF13183.2|0.0011,Fer4_4|PF12800.3|0.00087,Fer4_4|PF12800.3|0.17 R_Transcript_474735:3-737(+)
IMLPRTRILRTNATASSSKIQSIKLQSRKYPTILPSKSNVTFLTEEQVNILKERDQERIKSTLEEMDNYKKMNKEAPAYGTPAHMLDYGVKTFFLTEIIHGLLICAHAMFQPKFTINYPFEKGPISPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYNKEKLLSNGDRWEPEIAANLKAEIPYK*

Click here to download the sequence:
Link to NCBI Protein BLAST