Transcript Information: R_Transcript_475247.p1


Annotated TAIR IDAT1G72370.1
Annotated Gene Name40s ribosomal protein SA
Annotated Gene Symbol(s)P40, AP40, RP40, RPSAA
Annotation TypeOrtholog
Chromosome Positionchr1:27243148-27244842 | Reverse length=298
E-Value3E-94
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.59092319637579
Replicate 20.60421008392225
Replicate 30.24719501003042
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.23800639090551
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_475247.p1 GENE.R_Transcript_475247~~R_Transcript_475247.p1 ORF type:5prime_partial len:278 (+),score=65.85,Ribosomal_S2|PF00318.16|6.3e-14,Ribosomal_S2|PF00318.16|4.1e-14 R_Transcript_475247:3-836(+)
AGTTCTTCTAGCTTAATTCATTTACCAATCATCATGGCATTACCAGCTATCTTACAGCCAAAAGAGGAGGATATCCAGAGATTATTATCTGCTGGTGTTCATCTTGGAACCCTCAACTCCGATTATAAGATGCGTGAATACATCTGGAAGAGACGTAATGACGGTGTTCATGTCTTAAACTTAGCAAAGACCTGGGAAAAGATTGTCTTAGCTGCCCGTGTCATCGTTGCCATCGAGAACCCTGCTGATGTTGTTGTTATCTCCTCAACTCAATATGGTCAACGTGCTGTCCTTAAGTATGCCCACTACACTGGCTCCCAATATCTTGCTGGTAGATACACTCCAGGTACCTTTACCAACCAGATCACCAAGCAATTCCGTGAACCACGTTTGATCATCGTCACTGATCCTCGTGTTGATCACCAAGCCATTAAGGAAGCTTCCTACACCAACATCCCTGTGATTGCTTTCTGTGATGCTGATTCTCCATTAAAGTATGTTGATGTTGTCATCCCAGCTAACAACAAGGGTAAATTATCTATCGGTCTTCTTTACTGGTTATTAGCAAGAGAAGTTCTTCGATTAAGAGGTGCTATCTCCCGTGAGAACTGGGAAGTTCCTGTTGATCTTTTCTTTTACCGTGATCCTGAGGAATTAGAGAAGGCCGAGGAAACTGGTTTCAAGGCCACCACTACTGAAGCCGTTGAGGAAGTTGCTCCTGCTCAAACTGAGACCTGGAATGAGACCACCACTGCTGCTGCCCCAGCCCCTGCTGCTGAAGGTAACTGGAACGAGACTGCCAACTGGGATGCCAACGCTAACTGGAAGGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_475247.p1 GENE.R_Transcript_475247~~R_Transcript_475247.p1 ORF type:5prime_partial len:278 (+),score=65.85,Ribosomal_S2|PF00318.16|6.3e-14,Ribosomal_S2|PF00318.16|4.1e-14 R_Transcript_475247:3-836(+)
SSSSLIHLPIIMALPAILQPKEEDIQRLLSAGVHLGTLNSDYKMREYIWKRRNDGVHVLNLAKTWEKIVLAARVIVAIENPADVVVISSTQYGQRAVLKYAHYTGSQYLAGRYTPGTFTNQITKQFREPRLIIVTDPRVDHQAIKEASYTNIPVIAFCDADSPLKYVDVVIPANNKGKLSIGLLYWLLAREVLRLRGAISRENWEVPVDLFFYRDPEELEKAEETGFKATTTEAVEEVAPAQTETWNETTTAAAPAPAAEGNWNETANWDANANWKA*

Click here to download the sequence:
Link to NCBI Protein BLAST