Transcript Information: R_Transcript_475497.p1


Annotated TAIR IDAT2G18940.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:8203873-8206341 | Reverse length=822
E-Value7.1E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.16900889772888
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.4140904044664
Replicate 30.33614093741457
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.20266393228609


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_475497.p1 GENE.R_Transcript_475497~~R_Transcript_475497.p1 ORF type:internal len:108 (-),score=12.90,PPR_2|PF13041.2|1.1e-05,PPR_2|PF13041.2|3.6e-05,PPR_2|PF13041.2|3.4e-09,PPR|PF01535.16|0.26,PPR|PF01535.16|2.1e-07,PPR|PF01535.16|4.9e-06,PPR_3|PF13812.2|22,PPR_3|PF13812.2|1.8e-05,PPR_3|PF13812.2|7.3e-05,PPR_1|PF12854.3|9.6e+02,PPR_1|PF12854.3|7.6e-07,PPR_1|PF12854.3|0.0017,PPR_1|PF12854.3|1.5e+03 R_Transcript_475497:1-321(-)
CACACATGGCAAGCATCGTGTTCCATGTGTGGTAAGACGGGCATGGAGAAGTATGTGAACCAAGTTTTTCAGGAGATGGAGCGATGTGGTTTTGAGCCTGATAGGGACACGTTCAACACTTTGATTAGTGCATATGGCCGGTGTGGATCAAGGATAGATGCTGCCAAAATGTTCGAGGAGATGATGAAAGCAGGGTTCAGCCCCTGTGTCACAACCTACAATGCATTTTTGAATGTACTAGCTAGGAAGGGAGATTGGAGAGCTGCAGAATCAATCATTCGGGACATGAAGATTAAGGGGTTTAAACCTAACGAGACTTCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_475497.p1 GENE.R_Transcript_475497~~R_Transcript_475497.p1 ORF type:internal len:108 (-),score=12.90,PPR_2|PF13041.2|1.1e-05,PPR_2|PF13041.2|3.6e-05,PPR_2|PF13041.2|3.4e-09,PPR|PF01535.16|0.26,PPR|PF01535.16|2.1e-07,PPR|PF01535.16|4.9e-06,PPR_3|PF13812.2|22,PPR_3|PF13812.2|1.8e-05,PPR_3|PF13812.2|7.3e-05,PPR_1|PF12854.3|9.6e+02,PPR_1|PF12854.3|7.6e-07,PPR_1|PF12854.3|0.0017,PPR_1|PF12854.3|1.5e+03 R_Transcript_475497:1-321(-)
HTWQASCSMCGKTGMEKYVNQVFQEMERCGFEPDRDTFNTLISAYGRCGSRIDAAKMFEEMMKAGFSPCVTTYNAFLNVLARKGDWRAAESIIRDMKIKGFKPNETS

Click here to download the sequence:
Link to NCBI Protein BLAST