Transcript Information: R_Transcript_47559.p1


Annotated TAIR IDAT1G17370.1
Annotated Gene Nameoligouridylate binding protein 1B
Annotated Gene Symbol(s)UBP1B
Annotation TypeOrtholog
Chromosome Positionchr1:5951842-5954825 | Reverse length=419
E-Value8.8E-119
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.4580964543783
Replicate 22.0319000402869
Replicate 32.4279030631867
Condition 2: 8 Hour
Replicate 11.9182474843464
Replicate 22.2670018456501
Replicate 34.7679345869219
Condition 3: 24 Hour
Replicate 14.4434465602008
Replicate 22.9474769945933
Replicate 33.2276799538282


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47559.p1 GENE.R_Transcript_47559~~R_Transcript_47559.p1 ORF type:5prime_partial len:217 (+),score=38.99,RRM_1|PF00076.18|1.5e-14,RRM_1|PF00076.18|3.8e-16,RRM_6|PF14259.2|1.1e-06,RRM_6|PF14259.2|2.1e-11,RRM_5|PF13893.2|2.2e-11,RRM_5|PF13893.2|3 R_Transcript_47559:3-653(+)
TTTGTTTGGTTACTTAAAACCCTAAAAAATCCGATTTTGAAGATGCAACAACAGAGATTGAAGCAACATCAACATCATCAGCAACAACAACAAGCCCTGATGCAGCAATCTGTTTACCATCCTGGTTTACTGGCCGCTCCTCAGATAGAGCCTATCTTGAGTGGAAATCTGCCACCTGGGTTTGATTCAAGTACATGCCGCAGTGTGTATGTTGGAAACATTCATTCTCAGGTCACTGAACCCCTTCTTCAGGAAGTTTTTTCAAACACTGGCCCAATAGAGGGATGCAAGCTGATCCGCAAGGAGAAGTCCTCCTATGGTTTTGTGGACTATTTTGACCGCAGATCGGCATCCCTTGCTATTGTGACCCTGAATGGGCGGCATCTGTTTGGACAACCCATCAAAGTTAATTGGGCATATGCCAGCAGTCAGAGGGAGGATACAACAAATCATTTTAACATATTTGTTGGAGATCTAAGCCCAGAGGTTACTGATGCTACACTGTTTGCATGCTTCTCTGCTTATCAGACCTGCTCAGATGCTAGAGTCATGTCGAATCAGAAGACTGGGCGTTCCAGGGGCTTTGGATTTGTTTCATTCAGGAACCAGCAGGATGCCCAGAGTGCAATAAATGACCTAAATGTACTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47559.p1 GENE.R_Transcript_47559~~R_Transcript_47559.p1 ORF type:5prime_partial len:217 (+),score=38.99,RRM_1|PF00076.18|1.5e-14,RRM_1|PF00076.18|3.8e-16,RRM_6|PF14259.2|1.1e-06,RRM_6|PF14259.2|2.1e-11,RRM_5|PF13893.2|2.2e-11,RRM_5|PF13893.2|3 R_Transcript_47559:3-653(+)
FVWLLKTLKNPILKMQQQRLKQHQHHQQQQQALMQQSVYHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHSQVTEPLLQEVFSNTGPIEGCKLIRKEKSSYGFVDYFDRRSASLAIVTLNGRHLFGQPIKVNWAYASSQREDTTNHFNIFVGDLSPEVTDATLFACFSAYQTCSDARVMSNQKTGRSRGFGFVSFRNQQDAQSAINDLNVL*

Click here to download the sequence:
Link to NCBI Protein BLAST