Transcript Information: R_Transcript_475594.p2


Annotated TAIR IDAT1G20960.1
Annotated Gene NameU5 small nuclear ribonucleoprotein helicase, putative
Annotated Gene Symbol(s)emb1507
Annotation TypeHomolog
Chromosome Positionchr1:7302591-7309914 | Reverse length=2171
E-Value1E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.11198135555042
Replicate 20.51524663598277
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_475594.p2 GENE.R_Transcript_475594~~R_Transcript_475594.p2 ORF type:complete len:163 (+),score=42.34,Sec63|PF02889.12|2.2e-22 R_Transcript_475594:50-490(+)
ATGGAGGACGAAGACCGTAACAAGGTTCTCAAGGTGGGCAAGATTGACAACAGACAAACCAAGCAAATTGCTCGTTCTTGTGACAGATTTCCTTCGCTTGAAGTCAAGTTTGAGGCTGACAAGAAGAAGGCTTCTCCTGATGACCCTGTGAACCTCCACATCTCTTTGGAGAGGGCCATTGATAGTGACACTCTTTCCCCTGTCATCGCTCCTTACTACCCTATCGAGAAGATTGAGTCTTGGTGGGTTGTACTTGGCGATGTTCAGTCCAACCACTTGTACGCTGTCAAAAAGATCCATCCCATCAAGCAGCTCGAGTTTGACTTTGGCTTTTCTGCTCCTGCTGCCCCTGGCGACTACAACCTCTCCCTCTACTTGATGTGCGACTCTTACCAATCTGCAGATCAAGAATTGTCCCTCGAATTCCAAGTGCAAAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_475594.p2 GENE.R_Transcript_475594~~R_Transcript_475594.p2 ORF type:complete len:163 (+),score=42.34,Sec63|PF02889.12|2.2e-22 R_Transcript_475594:50-490(+)
MEDEDRNKVLKVGKIDNRQTKQIARSCDRFPSLEVKFEADKKKASPDDPVNLHISLERAIDSDTLSPVIAPYYPIEKIESWWVVLGDVQSNHLYAVKKIHPIKQLEFDFGFSAPAAPGDYNLSLYLMCDSYQSADQELSLEFQVQN*

Click here to download the sequence:
Link to NCBI Protein BLAST