Transcript Information: R_Transcript_475676.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value7E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.16932500335724
Replicate 30.18473175480768
Condition 2: 8 Hour
Replicate 10.19746665280036
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.18514360667503
Replicate 20
Replicate 30.17651374747498


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_475676.p1 GENE.R_Transcript_475676~~R_Transcript_475676.p1 ORF type:5prime_partial len:124 (+),score=20.37,RVT_1|PF00078.23|1.5e-13 R_Transcript_475676:1-372(+)
GGAAATTTTGATGCTAAGAAAGGGTTGAGGCAAGGAGACCCACTATCCCCATACTTGTTTGTAATTGTTATGGAGTATCTGAATAGTTGCTTACAAGAGATGTGTAAGAAGCAGGAGTTCAAGTTTCATCCGAAATGTAGGAAGCTTAATTTCACTCACTTGGTCTTTGCTAATGACGTAATGATATTTGCTAGAGGTGACCTTCAGTCAATTAAACTCTTAAAAGACGCTTTTGATAAATTCTCTCAGGCTTCTGGCCTCATAGCCAATATGAATAAGAGCTCATTGTTCTGTGGAGGTATAAAGGAGACTGATAAGCAGCAGATGGTGTACTTTTTACAATTGAAGGAGGGATCTATGCCTGTAAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_475676.p1 GENE.R_Transcript_475676~~R_Transcript_475676.p1 ORF type:5prime_partial len:124 (+),score=20.37,RVT_1|PF00078.23|1.5e-13 R_Transcript_475676:1-372(+)
GNFDAKKGLRQGDPLSPYLFVIVMEYLNSCLQEMCKKQEFKFHPKCRKLNFTHLVFANDVMIFARGDLQSIKLLKDAFDKFSQASGLIANMNKSSLFCGGIKETDKQQMVYFLQLKEGSMPVR*

Click here to download the sequence:
Link to NCBI Protein BLAST