Transcript Information: R_Transcript_475816.p2


Annotated TAIR IDAT1G09690.1
Annotated Gene NameTranslation protein SH3-like family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:3136407-3137430 | Reverse length=164
E-Value4E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.3065153345445
Replicate 30
Condition 2: 8 Hour
Replicate 10.17872894122077
Replicate 20.16321811562909
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.1609872911721
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_475816.p2 GENE.R_Transcript_475816~~R_Transcript_475816.p2 ORF type:3prime_partial len:137 (+),score=0.04,Ribosomal_L21e|PF01157.14|5.7e-47 R_Transcript_475816:35-442(+)
ATGACAAATCCAAAAGGTTATCGTCGTGGTACTCGCCATTTGTTCTCGCGAGATTTCAAGAAAAATGGACGAATTCCTTTGGCTACCTACATGAAAATCTTCAAACGCGGTGACATTGTCGACATTAAAGGCAATGGTGCTGTACAAAAAGGTATGCCACATCGATTCTATCACGGTAAAACAGGTCGTGTTTTCAATGTAACTCGACATGCTGTCGGTATTATCGTTAACAAACGTGTTCGTCATCGTATTATTGCCAAACGAATCAATGTTCGAATTGAACATGTTAAACACTCGAAATGTCGTTCGGATTTTCTTAATCGTGTTAAACTCAACGAACAATTGAAACGAGCAGCTAAAGAAACTGGTAAACAAGTTCCACTCAGCAGCATCAAACGACAACCCGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_475816.p2 GENE.R_Transcript_475816~~R_Transcript_475816.p2 ORF type:3prime_partial len:137 (+),score=0.04,Ribosomal_L21e|PF01157.14|5.7e-47 R_Transcript_475816:35-442(+)
MTNPKGYRRGTRHLFSRDFKKNGRIPLATYMKIFKRGDIVDIKGNGAVQKGMPHRFYHGKTGRVFNVTRHAVGIIVNKRVRHRIIAKRINVRIEHVKHSKCRSDFLNRVKLNEQLKRAAKETGKQVPLSSIKRQPE

Click here to download the sequence:
Link to NCBI Protein BLAST