Transcript Information: R_Transcript_47599.p1


Annotated TAIR IDAT2G26590.1
Annotated Gene Nameregulatory particle non-ATPase 13
Annotated Gene Symbol(s)RPN13
Annotation TypeOrtholog
Chromosome Positionchr2:11311182-11314717 | Reverse length=300
E-Value9.4E-137
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 143.748225772116
Replicate 239.554320784252
Replicate 337.094136365382
Condition 2: 8 Hour
Replicate 136.491837437507
Replicate 248.111961897003
Replicate 353.16665304294
Condition 3: 24 Hour
Replicate 144.804752815358
Replicate 243.612495806206
Replicate 349.282638295014


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47599.p1 GENE.R_Transcript_47599~~R_Transcript_47599.p1 ORF type:complete len:310 (+),score=59.09,Proteasom_Rpn13|PF04683.9|8.7e-25,RPN13_C|PF16550.1|1.5e-22 R_Transcript_47599:541-1470(+)
ATGTCAGGACAGGAAACCATGTTGGAATTTCGTGCTGGAAAAATGTTTCTTGAGGGGAAAAAGGTCACCCCAGATACTCGTAAAGGGCTAGTTCGAATAACACGGGGTGAAGGGGGCTTGGTCCATTTTCAGTGGCTTGATCGGGTGCAGAATGTGGTTGAGGATGACCAGATTGTTTTTCCAGATGAAGCGGTTTTTGAGAAGGTTGGGCAAGCATCTGGAAGGGTCTACATATTAAAGTTCAGCACAGATGACAGGAAGTTTTTTTTCTGGATGCAAGAGCCAAAAGCTGATGATGATGAACAGTTGTGCCGTTCAGTCAACTATTATCTTAATCGACCTTTAGAATTCCTTGCGGAAGAGGATTCTGGAGCTTCTGTTCCTCTTCAAGCTGATGAGATGGCTGAAGATGATATTTCATCTAGAGCGGGTAATCTAATTGGCTCTAGCATGGGTGCTGAAGTAGTGAGTGATGTAACACTTGCGCCTGGTCCCGTAAAGTTGGCAGACTTGCAAAGGATCTTAAGTAATATCGGATCTGCAGGTACTTCTGGTGACATGGAAGATCCGGATGACGGTCTTGGTTTGGGGGATCTGCTAAAGCCTGATTTGGTACTACCATTACTGGAGACATTACCTATAGAAGAACGCCTATCACCATATTTACCGGAGGGTCAACGGACACTGGATGACTTGATAGAAGTATTGCAGAGCCCTCCTTTCCGCCAACAAGTAGATGCTTTCACTTATGTTCTAAAGACGGGCCAAATAGATCTGGCGCAGTTCGGTATTGACCCAGCTAAATATAAACTCAGCGTTCTATCTTTCTTGGAGGCACTTGAAGATTCCGTTGTGGTATCCAATGAAATGAGGCAAGAGACGAGACCTCAGGCGCAAGGCTCTAGTGATCCAATGGACGAAGGGCAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47599.p1 GENE.R_Transcript_47599~~R_Transcript_47599.p1 ORF type:complete len:310 (+),score=59.09,Proteasom_Rpn13|PF04683.9|8.7e-25,RPN13_C|PF16550.1|1.5e-22 R_Transcript_47599:541-1470(+)
MSGQETMLEFRAGKMFLEGKKVTPDTRKGLVRITRGEGGLVHFQWLDRVQNVVEDDQIVFPDEAVFEKVGQASGRVYILKFSTDDRKFFFWMQEPKADDDEQLCRSVNYYLNRPLEFLAEEDSGASVPLQADEMAEDDISSRAGNLIGSSMGAEVVSDVTLAPGPVKLADLQRILSNIGSAGTSGDMEDPDDGLGLGDLLKPDLVLPLLETLPIEERLSPYLPEGQRTLDDLIEVLQSPPFRQQVDAFTYVLKTGQIDLAQFGIDPAKYKLSVLSFLEALEDSVVVSNEMRQETRPQAQGSSDPMDEGQ*

Click here to download the sequence:
Link to NCBI Protein BLAST