Transcript Information: R_Transcript_476116.p1


Annotated TAIR IDAT4G25100.1
Annotated Gene NameFe superoxide dismutase 1
Annotated Gene Symbol(s)FSD1, ATFSD1
Annotation TypeHomolog
Chromosome Positionchr4:12884649-12886501 | Reverse length=212
E-Value4E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.64530670041935
Replicate 20.53020960647217
Replicate 30.69414356351977
Condition 2: 8 Hour
Replicate 10.24733196916409
Replicate 20.67760248003593
Replicate 30.091674801113066
Condition 3: 24 Hour
Replicate 10.69569112811225
Replicate 20.22278039283411
Replicate 30.44217585226055


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_476116.p1 GENE.R_Transcript_476116~~R_Transcript_476116.p1 ORF type:5prime_partial len:198 (+),score=3.76,Sod_Fe_C|PF02777.14|1.6e+03,Sod_Fe_C|PF02777.14|4.9e-41,Sod_Fe_N|PF00081.18|1.5e-29 R_Transcript_476116:3-596(+)
GCCATGCCCGTTGAATTACCTCCACTCCCTTATCCCATGGATGCTCTTGCTCCTCACATTTCCAAAGAGACACTCGAGTTTCATTACGGAAAACACCACGCTGGTTATGTCACGAAATTAAACACTTTAATTGCGGGAACAGCCAACGATAGCAAGTCACTCGTCGATCTCATTTTAACCACTCAAGGTGGTATTTTCAACTGCGCTGCTCAAACTTGGAATCACACATTTTATTGGAGCAGTTTGAGTCCAAACGGAGGAGGAGCTCCAACTGGTCCAATCAAAGACGCGATTGAAGCAACGTGGGGCAACTTCGGCCACTTCAAAGAACAATTCAATGCTGCTGCTGCCGGTCACTTTGGTTCAGGTTGGGCTTGGTTAGTTCAAAACAAAGATGGCAAACTTGAAATTACCCAAACCCACGATGCTGGTTGCCCACTCACCGAAGGCGTTACCCCCATCCTCACTCTCGATGTTTGGGAACACGCTTATTATATCGATTACCGAAACAACCGACCACTCTACATCGAAACGTGGTGGAACTTAGTTAACTGGGAATTCGCTAATCAAAACTTGGCCAAAGCCAACCTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_476116.p1 GENE.R_Transcript_476116~~R_Transcript_476116.p1 ORF type:5prime_partial len:198 (+),score=3.76,Sod_Fe_C|PF02777.14|1.6e+03,Sod_Fe_C|PF02777.14|4.9e-41,Sod_Fe_N|PF00081.18|1.5e-29 R_Transcript_476116:3-596(+)
AMPVELPPLPYPMDALAPHISKETLEFHYGKHHAGYVTKLNTLIAGTANDSKSLVDLILTTQGGIFNCAAQTWNHTFYWSSLSPNGGGAPTGPIKDAIEATWGNFGHFKEQFNAAAAGHFGSGWAWLVQNKDGKLEITQTHDAGCPLTEGVTPILTLDVWEHAYYIDYRNNRPLYIETWWNLVNWEFANQNLAKANL*

Click here to download the sequence:
Link to NCBI Protein BLAST