Transcript Information: R_Transcript_47616.p1


Annotated TAIR IDAT5G51830.1
Annotated Gene NamepfkB-like carbohydrate kinase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21069709-21071450 | Forward length=343
E-Value2E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.578663619678
Replicate 211.725206725985
Replicate 312.34583909403
Condition 2: 8 Hour
Replicate 112.242932473623
Replicate 210.89003985772
Replicate 314.261979773161
Condition 3: 24 Hour
Replicate 118.038277107482
Replicate 29.7386857438913
Replicate 312.507259821084


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47616.p1 GENE.R_Transcript_47616~~R_Transcript_47616.p1 ORF type:complete len:154 (+),score=13.87,Lipoxygenase|PF00305.15|1.5e-13,PfkB|PF00294.20|1.7e-06 R_Transcript_47616:480-941(+)
ATGCCAAACAAGAGGAAGGATTATGCACGTCCTGTTCTCGGGGGATCAAGTGAGTACCCTTTTCCTCGCAGAGGGAGAACAGGTCGCAAACCAACAAGAACTGATCCAAACACCGAGAGCTGTTTACCACTTCTAAGCCTGAAAATATACGTTCCAAAAGAGATGAGCAGTTTGGACATGTGCTTCATTTTGGCTTACATCTTGATGAAGGATAATCTTGACAACTCAGGCATAAGATTTTATCCTTTAACAAGGACAACACTAGCATTTGTTACTTTAAGAGCTGACGGAGAGCGTGAGTTTCTGTTTTTCCGTAATCCAAGTGCTGATATACTTCATGATTCGGAATTCGATAGACGCATAATTGAGAAGGCAAGGATCTTCCACTGTGGTTCAATTAGTTTGATAGAGGAGCCCTGTAGATCAGAGCGTTGTTCCTTTGTTCAACTTTTTGAACCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47616.p1 GENE.R_Transcript_47616~~R_Transcript_47616.p1 ORF type:complete len:154 (+),score=13.87,Lipoxygenase|PF00305.15|1.5e-13,PfkB|PF00294.20|1.7e-06 R_Transcript_47616:480-941(+)
MPNKRKDYARPVLGGSSEYPFPRRGRTGRKPTRTDPNTESCLPLLSLKIYVPKEMSSLDMCFILAYILMKDNLDNSGIRFYPLTRTTLAFVTLRADGEREFLFFRNPSADILHDSEFDRRIIEKARIFHCGSISLIEEPCRSERCSFVQLFEP*

Click here to download the sequence:
Link to NCBI Protein BLAST