Transcript Information: R_Transcript_47619.p1


Annotated TAIR IDAT3G22400.1
Annotated Gene NamePLAT/LH2 domain-containing lipoxygenase family protein
Annotated Gene Symbol(s)LOX5
Annotation TypeOrtholog
Chromosome Positionchr3:7927011-7931167 | Forward length=886
E-Value6.7e-310
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.065733985599
Replicate 21.6750295322835
Replicate 31.9124363484728
Condition 2: 8 Hour
Replicate 13.6796939902168
Replicate 23.2773834238472
Replicate 33.7717632457947
Condition 3: 24 Hour
Replicate 13.492653418686
Replicate 22.5369685551313
Replicate 33.6547187788882


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47619.p1 GENE.R_Transcript_47619~~R_Transcript_47619.p1 ORF type:3prime_partial len:539 (+),score=81.16,Lipoxygenase|PF00305.15|1.5e-258 R_Transcript_47619:480-2093(+)
ATGCCAAACAAGAGGAAGGATTATGCACGTCCTGTTCTCGGGGGATCAAGTGAGTACCCTTTTCCTCGCAGAGGGAGAACAGGTCGCAAACCAACAAGAACTGATCCAAACACAGAGAGCCGGTTACCACTTCTAAGCCTGGACATATATGTACCAAGAGATGAGCGGTTTGGACACCTGAAATTTTCGGACTTTCTAGCATATGCTCTAAAATCCCTAGTCCAGGTGTTAATCCCAGAGCTCCAATCCATATTTGACAAGACACCCAATGAATTTGATTCTTTTGGAGACATTTTGAAGCTCTATGAAGGGGGAATTAAGTTACCAAATGGTGCACTTTCAAAACTTAAAGATCGCATCCCATGGGAGATGCTTAAGGAACTTATTCGCTCTGATGGTGAACAGTTCCTCAAATTCCCAATGCCTAATGTGATCAAAGAGGATAAAACTGCCTGGAGGACAGATGAAGAGTTTGGACGGGAAATGCTGGCTGGAGTCAATCCTGTTGTCATTCGCCGCCTTGAAGAATTCCCACCAAAAAGCAAATTGGACCCTAGAATATATGGTAATCAAAATAGTTCAATAACCAAAGAGCATATAGAGAAAAACATGGAAGGATTTACTGTAGAAAAAGCACTTCAGAGTAACAGACTATATATACTAGACCATCATGATGCATTAATGCCATACCTGGGGCGGATAAATTCCACTGCGACAAAGACTTATGCAACTCGAACAGTCCTCTTTCTGAAATATGATGGGACGCTGAAGCCATTAGCAATAGAGCTGAGCTTGCCTCACCTACAAGGAGATTCTCGTGGTGCTGTCAGTCAGGTATATACTCCTGAAGAAGACGGTACTGTCCAAGGTTCTGTGTGGCAACTCGCCAAAGCCTATGCTGCCGTCAATGATTCTGGTTATCATCAGCTCATAAGTCATTGGTTAAACACCCATGCCGTAATTGAACCTTTTATAATTGCAACTAATAGACAGTTGAGCGTTCTTCATCCAATCTACAAGCTCTTGCACCCTCACTTCCGCGACACAATGAACATTAATGCCTTGGCTAGGCAAATCCTCATCAATGCCGGTGGGGTACTGGAGAGAACAGTCTTTCCTGCTAGGTATGCAATGGAAATGTCGTCGATTTTATACAAGAATTGGGCTTTAACTGATCATGCACTTCCGGTTGATTTGCTTAAGAGAGGGATAGCAGTAGAAGACTCCAGCCAGCCCCATGGCCTCAAGCTTTTGATTGAGGACTACCCATTTGCAGTTGATGGGCTTGACATTTGGTCGGCAATCCAAACATGGGTCATCGATTACTGCTCTTTCTACTATCCGAGAGACAACCTCGTTGAAGGTGACCCCGAACTCCAATCATGGTGGCATGAGATCCGTACAGTGGGCCATGGGGATAAGAATGATGAACCATGGTGGCCTGAAATGAAGACAAGGCATGATCTTGTCAAAACATGCACCACTATTATATGGATCGCGTCTGCCCTCCATGCTGCTGTCAATTTCGGGCAGTACCCTTATGCAGGGTACCTCCCAAACCGGCCTACTGTAAGCCGTCGCTTCATGCCTCAGACAGGCACTGCTGAATATGCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47619.p1 GENE.R_Transcript_47619~~R_Transcript_47619.p1 ORF type:3prime_partial len:539 (+),score=81.16,Lipoxygenase|PF00305.15|1.5e-258 R_Transcript_47619:480-2093(+)
MPNKRKDYARPVLGGSSEYPFPRRGRTGRKPTRTDPNTESRLPLLSLDIYVPRDERFGHLKFSDFLAYALKSLVQVLIPELQSIFDKTPNEFDSFGDILKLYEGGIKLPNGALSKLKDRIPWEMLKELIRSDGEQFLKFPMPNVIKEDKTAWRTDEEFGREMLAGVNPVVIRRLEEFPPKSKLDPRIYGNQNSSITKEHIEKNMEGFTVEKALQSNRLYILDHHDALMPYLGRINSTATKTYATRTVLFLKYDGTLKPLAIELSLPHLQGDSRGAVSQVYTPEEDGTVQGSVWQLAKAYAAVNDSGYHQLISHWLNTHAVIEPFIIATNRQLSVLHPIYKLLHPHFRDTMNINALARQILINAGGVLERTVFPARYAMEMSSILYKNWALTDHALPVDLLKRGIAVEDSSQPHGLKLLIEDYPFAVDGLDIWSAIQTWVIDYCSFYYPRDNLVEGDPELQSWWHEIRTVGHGDKNDEPWWPEMKTRHDLVKTCTTIIWIASALHAAVNFGQYPYAGYLPNRPTVSRRFMPQTGTAEYA

Click here to download the sequence:
Link to NCBI Protein BLAST