Transcript Information: R_Transcript_476453.p2


Annotated TAIR IDAT3G48930.1
Annotated Gene NameNucleic acid-binding, OB-fold-like protein
Annotated Gene Symbol(s)EMB1080
Annotation TypeOrtholog
Chromosome Positionchr3:18141017-18142189 | Reverse length=160
E-Value1.1E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4045816826576
Replicate 21.3829898477801
Replicate 30.96016265373094
Condition 2: 8 Hour
Replicate 10.29324389158378
Replicate 20.66948748027502
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.13106409992154


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_476453.p2 GENE.R_Transcript_476453~~R_Transcript_476453.p2 ORF type:3prime_partial len:167 (+),score=24.05,Ribosomal_S17|PF00366.16|6.7e+03,Ribosomal_S17|PF00366.16|5.8e-30,Ribosomal_S17_N|PF16205.1|3.2e-26 R_Transcript_476453:32-529(+)
ATGGATCAAAAGACATATCAAAAACAAAAACCAGTGTGGAAGGGAAAATTGAGAGTTCTTCCAAAGAGAAATAAGAGCAGAAGAAAACACGAAAAGGCGCTCCCACCTGCAGGATCCAGAAGCAAGTTGCGCTTGTACAGAAACGTCGGTCTTGGATTCAAAACCCCAAAGGAAGCAATCACTGGAAGCTACATTGACAAAAAGTGCCCATTTACTGGAAACATCAGTATTCGTGGTAGAATTTTGAAGGGAAGAGTTATTTCCACCAAGATGAACAGAACTATCATTATTCGTAGAGATTACCTTCACTATGTCCCAAAATACAATCGTTTCGAAAAAAGACACAAAAATATTGCAGCACACTGCTCCCCATGCTTCATTGTTAAAGAAGGAGATGTTGTCACCATCGGACAATGCAGACCTCTTTCCAAGACTGTGAGATTCAATGTTCTTAAGGTTCAATCTGAGGAACTCACTGGTGCAGGAAATAAGAAAAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_476453.p2 GENE.R_Transcript_476453~~R_Transcript_476453.p2 ORF type:3prime_partial len:167 (+),score=24.05,Ribosomal_S17|PF00366.16|6.7e+03,Ribosomal_S17|PF00366.16|5.8e-30,Ribosomal_S17_N|PF16205.1|3.2e-26 R_Transcript_476453:32-529(+)
MDQKTYQKQKPVWKGKLRVLPKRNKSRRKHEKALPPAGSRSKLRLYRNVGLGFKTPKEAITGSYIDKKCPFTGNISIRGRILKGRVISTKMNRTIIIRRDYLHYVPKYNRFEKRHKNIAAHCSPCFIVKEGDVVTIGQCRPLSKTVRFNVLKVQSEELTGAGNKKK

Click here to download the sequence:
Link to NCBI Protein BLAST