Transcript Information: R_Transcript_47667.p1


Annotated TAIR ID
Annotated Gene Name
Annotated Gene Symbol(s)
Annotation Type
Chromosome Position
E-Value
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1729715422284
Replicate 21.9996476586951
Replicate 32.2595081302327
Condition 2: 8 Hour
Replicate 12.1654166279877
Replicate 22.7380671642268
Replicate 31.8522051653456
Condition 3: 24 Hour
Replicate 11.4055800343492
Replicate 21.6503935224241
Replicate 31.2656155771335


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47667.p1 GENE.R_Transcript_47667~~R_Transcript_47667.p1 ORF type:5prime_partial len:294 (+),score=40.15,Retrotrans_gag|PF03732.13|3.3e-09,Retrotrans_gag|PF03732.13|8.1e+03 R_Transcript_47667:3-884(+)
CATCCCATGTTCCAACAATTCCTTAGAGCTGAAGAAGAATGGGATGATCAAGTGAAGCACAATCTCCCAAGTAAGATTGTTTTGAGTGACCTTCCAAAGTTCAAGGGGACCCAAAATCCCCGAAGCCACCTTCGTAGTTTCAAAACATCCATGGTGGTCAAAGGAGTACCTAAAGAGATGTATGTCCACCTTTTCTCTCTGACTCTAGAAGGGGCGGCCAATGATTGGTTTGGTACCCTTAAGCCATCCAAGCTGAAAGACTGGGATGTTCTTGAAGAAGAATTCTTAGCCCAGTACAAATACAATGTAGAGTTCCCAATAACCCAAAGGGAATTGGAGGTCACCAAGCAAAATGATGATGAAGGATTCACAAATTTTCTTTCCCGATGGAGAGAAAAGGCGGCCCAAGTTGTTAACAGGCCGTCAGAGAAGGACCAAGTGAGAATGTTCATAAAGAATCTCCAACCATCGTATGCTCAACATTTGCGCTTTCAGCTAATTAGTATATTTTTCGAGTTATATGATGTAGGGATACAAATCGAAGACTCACTTTTACAAGAAAAGAAAACGGGTCAGAGAAGTGCTTCCAAAAGCAATGGCATCAACGCCTTAGCCTCCACCAAGAGAAACTTCACAAACTTGGGCATGTCACTATCAAAAGCCTTCGAAAAGCTCCAAGGCAAAGGTCTCCTGCAACCCCTATCACCCCTCCCAGATCTTCCACCGCATCGTAGACCGAAGAATTGGGATGGAAATGCCTACTGCAATTTTCATAGTCAAAATGGGCATCCCACCGACAACTGCCCTCGGCTGAGGCATGAGATACAGAAACTCATCAATAAAGGGACCATCATGCCACCACGAGGGACAACCTTAGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47667.p1 GENE.R_Transcript_47667~~R_Transcript_47667.p1 ORF type:5prime_partial len:294 (+),score=40.15,Retrotrans_gag|PF03732.13|3.3e-09,Retrotrans_gag|PF03732.13|8.1e+03 R_Transcript_47667:3-884(+)
HPMFQQFLRAEEEWDDQVKHNLPSKIVLSDLPKFKGTQNPRSHLRSFKTSMVVKGVPKEMYVHLFSLTLEGAANDWFGTLKPSKLKDWDVLEEEFLAQYKYNVEFPITQRELEVTKQNDDEGFTNFLSRWREKAAQVVNRPSEKDQVRMFIKNLQPSYAQHLRFQLISIFFELYDVGIQIEDSLLQEKKTGQRSASKSNGINALASTKRNFTNLGMSLSKAFEKLQGKGLLQPLSPLPDLPPHRRPKNWDGNAYCNFHSQNGHPTDNCPRLRHEIQKLINKGTIMPPRGTTLD*

Click here to download the sequence:
Link to NCBI Protein BLAST