Transcript Information: R_Transcript_47697.p1


Annotated TAIR IDAT1G03910.2
Annotated Gene NameEXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cactin protein, cactus-binding domain, C-terminal (InterPro:IPR019134), Cactin, central region (InterPro:IPR018816); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G36815.2).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:996432-1000231 | Forward length=716
E-Value1E-277
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.16242292476
Replicate 217.380439707847
Replicate 320.851429736584
Condition 2: 8 Hour
Replicate 117.469654730813
Replicate 218.154058918821
Replicate 320.016682044479
Condition 3: 24 Hour
Replicate 123.256823530236
Replicate 216.341957383467
Replicate 320.240583639548


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_47697.p1 GENE.R_Transcript_47697~~R_Transcript_47697.p1 ORF type:complete len:691 (+),score=166.88,CactinC_cactus|PF09732.5|3.6e+03,CactinC_cactus|PF09732.5|1.9e-61,Cactin_mid|PF10312.5|2.2e+02,Cactin_mid|PF10312.5|6e-55,Cactin_mid|PF10312.5|1.1e+02 R_Transcript_47697:89-2074(+)
ATGGCGAAAGACGAGCGTAGAAGCAAAAGCAAGAGAGATAAACCTTCTTCATCCTCCTCTCGTAGAAGAGGCCGTTGTAAATCCGATACCGATTCCTCCGATTCCGAGTCCCAATCACGCTCCGATTCCTATTCCACCTCAACCTCCTCCTCTCCTCATCGCCGCCGCTTTCGCCACCACCACCGTCGCCTCCGTCACCGTTCACCGTCCGATTCCGACTCCACAAAGAAGCAGCGAAAGAGAAAACCTACGGAAGAAGAAATCAAGGAATACCTAGCAAAGAAAGCTCAGAAGAAGGCACTAAAAGTAGCGAAGAAGCTCAAAACCCAAACAGTTTCCGGCTACTCGAATGACTCTAATCCTTTCGGTGACGCGAACCTCAACGAGAAGTTCGTGTGGAAGAAGAAGATTGAGAAAGACCTGTCGCAAGGGGTGCCGTTGGATGAGTTTACAATTAGGGCTGAGAAGAAGAGGCAGAGAGAGAGAATGGCGGAGATCGAGAAGGTCAAGAAGAGGAGAGAGGAACGGGCGTTGGAGAAGGCGCAACGTGAGGAGGAGATGATGATGTTGCAGAGAGAGAGAGCGCGAGCTGAGGCCGACGATTTCGAGAAGAAAGAGGAAGAGTTTCATTTTGATCAGAGCAAGATTAGGTCTAGGATTAGGTTAATTGAAGGTAGGACCAAACCTATTGATGTTCTTACCAAGTATTTGGATGAGACTGGCGAGTTTGATGTCGAGTTGGATGAGCCTTACATGGTCTTCAAGGGCTTGACGGTTAAAGAAATGGAGGAGCTTCATGACGACATAAGGTTGCATCTGGACTTAGACAGAGCTACACCAACTCATGTAGAATATTGGGAGGCACTTATGGTGGTCTGTGAGTGGGAGCTTGGTGAAGCCAGGAGAAAGGATGCAATTGATCGGGCTAGAGTGCGTGGAGAACAGCCTCCTGCTGAGTTGCTTGCTGAAGAGCGAGGTATGCATTCCAGTATTGAAACGGATGTCAGAAATTTCTTAGAAGGGAGGACGCACAAAGGTTTGGTAGCACTACAAGCGCAAATTGAATCAGAGATGCGTTCTGGAAAGGCTAAGGTGGTTGAGTACTGGGAAGCTGTCCTTAAACGTCTTCACATATACAAGGCAAAGGCTTGTTTGAAGGAGATTCATGCGAAGATGCTAAGGAAACATTTACACCGTCTTGAACAACCAATTCAAGGTGAAAACTTGAAATCAGAGGAGTTTAAGTCTGAGGAGGAAGAAAGTGAACATGAAGTTGAAGATACTCGAGCATTTTCTCCAGAACCCATCACATATGATGAAGCTCCACAGTCAGAAGCTGAGGAAGGTTCATTTTCTCCACAGCTGTTACATGGTGAAGAAACGGAAGAAGCAATTGACCCTGATGAGGATAGGGCTATATTGGAAAAGAAGCGGTTGGCTGTTTTGAAGGAGCAACAGAGGCGGCTGAAAGAGGCCATGGCTTCAAAACCTGCTCAACCAGATGAGGACTTTGAGCGTAGGGCTGATAAAGTCATGGGAACAATGGACGAGGGTGATGCCGTATTTGGCTCTGGTGCTGAAGTAAACTTGGATTCCCAGGTTTACTGGTGGCATGACAAGTATCGTCCTAGAAAGCCCAAGTACTTCAATCGTGTTCATACTGGCTATGAATGGAACAAGTATAACCAGACGCATTATGACCATGATAACCCTCCTCCCAAGATTGTTCAAGGCTATAAGTTCAATATTTTCTACCCAGATCTTGTTGACAAGACGAAAGCTCCGACATACTTCATCGAGAAAGACGGCGACAGTACAGAGACCTGCATTATTAGGTTCCATGCTGGCCCACCTTACGAGGACATTGCTTTTCGCATTGTGAACAAAGAGTGGGAGTATTCACACAAGAAGGGCTACAAATGCACCTTTGAAAGAGGGATACTGCATGTATACTTTAACTTCAAGCGGTATCGGTATCGGAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_47697.p1 GENE.R_Transcript_47697~~R_Transcript_47697.p1 ORF type:complete len:691 (+),score=166.88,CactinC_cactus|PF09732.5|3.6e+03,CactinC_cactus|PF09732.5|1.9e-61,Cactin_mid|PF10312.5|2.2e+02,Cactin_mid|PF10312.5|6e-55,Cactin_mid|PF10312.5|1.1e+02 R_Transcript_47697:89-2074(+)
MAKDERRSKSKRDKPSSSSSRRRGRCKSDTDSSDSESQSRSDSYSTSTSSSPHRRRFRHHHRRLRHRSPSDSDSTKKQRKRKPTEEEIKEYLAKKAQKKALKVAKKLKTQTVSGYSNDSNPFGDANLNEKFVWKKKIEKDLSQGVPLDEFTIRAEKKRQRERMAEIEKVKKRREERALEKAQREEEMMMLQRERARAEADDFEKKEEEFHFDQSKIRSRIRLIEGRTKPIDVLTKYLDETGEFDVELDEPYMVFKGLTVKEMEELHDDIRLHLDLDRATPTHVEYWEALMVVCEWELGEARRKDAIDRARVRGEQPPAELLAEERGMHSSIETDVRNFLEGRTHKGLVALQAQIESEMRSGKAKVVEYWEAVLKRLHIYKAKACLKEIHAKMLRKHLHRLEQPIQGENLKSEEFKSEEEESEHEVEDTRAFSPEPITYDEAPQSEAEEGSFSPQLLHGEETEEAIDPDEDRAILEKKRLAVLKEQQRRLKEAMASKPAQPDEDFERRADKVMGTMDEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYFIEKDGDSTETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGYKCTFERGILHVYFNFKRYRYRR*

Click here to download the sequence:
Link to NCBI Protein BLAST